Job Description P35340 Confidence 99.94% Date Wed Jan 25 15:20:51 GMT 2012 Rank 88 Aligned Residues 278 % Identity 14% Template c2vq7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:flavin-containing monooxygenase; PDBTitle: bacterial flavin-containing monooxygenase in complex with2 nadp: native data Resolution 2.60 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.							.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.																													.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	.	.	.	.	.	.	G	I	R	T	G	L	M	G	E	.	.	R	F	G	G	Q	I	L	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	I	E	N
Query Conservation																							.	.	.	.	.	.										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	A	I	L	G	A	G	P	S	G	M	A	Q	L	R	A	F	Q	S	A	Q	E	K	G	A	E	I	P	E	L	V	C	F	E	K	Q	A	D	W	G	G	Q	W	N	Y	T	W	R	T	G	L	D	E	N	G	E	P	V	H	S	S	M	Y	R	Y	L	W	S	N	G	P	K	E	C	L	E	F	A	D
Template Known Secondary structure									S																T	T											S	S	S	S	S		G	G	G	S			S			S	B		T	T	S	S	B							T	T		B		S	S		G	G	G	S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		258	.									260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.																									.	.																									.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.																									.	.																									.	.	.	.
Query Sequence		Y	I	.	.	.	.	.	.	.	.	S	V	P	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D	V	D	.	.	V	I	D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	.	.	.	.	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G
Query Conservation				.	.	.	.	.	.	.	.																									.	.																									.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																									.	.																									.	.	.	.
Template Conservation
Template Sequence		Y	T	F	D	E	H	F	G	K	P	I	A	S	Y	P	P	R	E	V	L	W	D	Y	I	K	G	R	V	E	K	A	G	V	R	K	Y	I	R	F	N	T	A	V	R	H	V	E	F	N	E	D	S	Q	T	F	T	V	T	V	Q	D	H	T	T	D	T	I	Y	S	A	A	F	D	Y	V	V	C	C	T	G
Template Known Secondary structure		B							S	S				S	S		B																T		G	G	G				S										T	T	T	T									T	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
				324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	Q	V	L	Q	D	K	L	R
Query Conservation		.	.
Alig confidence		.	.																																																																								.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		H	F	S	T	P	Y	V	P	E	F	E	G	F	E	K	F	G	G	R	I	L	H	A	H	D	F	R	D	A	L	E	F	K	D	K	T	V	L	L	V	G	S	S	Y	S	A	E	D	I	G	S	Q	C	Y	K	Y	G	A	K	K	L	I	S	C	Y	R	T	A	P	M	G	Y	K	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S								B	T	T	T	T			S					G	G	G				G	G	G	G	T	T								S	S													T	T		S							S	S	S						.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.																					.	.
Query SS confidence																																																											.																					.	.
Query Sequence		S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N	I	E	L	A	G	I	F	V	Q	I	G	L	L	P	N	T	N	W	L	.	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	K	C	E	T	.	.
Query Conservation																																																											.																					.	.
Alig confidence		.	.																			.	.	.	.	.	.	.	.	.	.																												.																					.	.
Template Conservation		.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	W	P	E	N	W	D	E	R	P	N	L	V	R	V	D	T	E	N	.	.	.	.	.	.	.	.	.	.	A	Y	F	A	D	G	S	S	E	K	V	D	A	I	I	L	C	T	G	Y	I	H	H	F	P	F	L	N	D	D	L	R	L	V	T	N	N	R	L	W	P	L	N	L	Y	K	G	V	V	W
Template Known Secondary structure		.	.			T	T												S	S		.	.	.	.	.	.	.	.	.	.				T	T	S						S													T	T	B		T	T	T						S		S	S		S	S			T	T	T
Template Predicted Secondary structure		.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
				242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.											260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
			479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		E	D	N	P	K	F	F	Y	I	G	M	Q	D	Q	W	Y	S	F	N	M	F	D	A	Q	A	W	Y	A	R	D	V	I	M
Template Known Secondary structure		T	T		T	T					S		S			S	S																	T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions