Job Description P35340 Confidence 100.00% Date Wed Jan 25 15:20:51 GMT 2012 Rank 2 Aligned Residues 389 % Identity 17% Template c2v6oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin glutathione reductase; PDBTitle: structure of schistosoma mansoni thioredoxin-glutathione2 reductase (smtgr) Resolution 2.20 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		E	Q	I	R	H	I	D	G	D	F	E	F	E	T	Y	Y	S	L	S	C	H	N	C	P	D	V	V	Q	A	L	N	L	M	S	V	L	N	P	R	I	K	H	T	A	I	D	G	G	T	F	Q	N	E	I	.	.	T	D	R	N	V	M	G	V	P	A	V	F	V	N	G	K	E	F	G	Q	G	R	M	T
Query Conservation																																																								.	.
Alig confidence																																																								.	.																			.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		Q	W	L	R	K	T	V	D	S	A	A	V	I	L	F	S	K	T	T	C	P	Y	C	K	K	V	K	D	V	L	A	E	A	K	I	K	H	A	T	I	E	L	D	Q	L	S	N	G	S	A	I	Q	K	C	L	A	S	F	S	K	I	E	T	V	P	Q	M	F	V	R	G	K	F	I	.	.	.	.	G	D
Template Known Secondary structure												S							S	S														T	T								G	G	G	S	T	T													S			S	S						T	T				.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.											.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	E	I	V	A	K	I	D	T	G	A	E	K	R	A	A	E	E	L	N	K	R	D	A	Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	R	.	.	.	.	.	.	.	.	.	.	F	G	G	Q	I	L	D	T	V	D	I	E	N
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		S	Q	T	V	L	K	Y	Y	S	N	D	E	L	A	G	I	V	N	.	.	E	S	K	Y	D	Y	D	L	I	V	I	G	G	G	S	G	G	L	A	A	G	K	E	A	A	K	Y	G	A	K	T	A	V	L	D	Y	V	E	P	T	P	I	G	T	T	W	G	L	G	G	T	C	V	N	V	G	C	I	P	K
Template Known Secondary structure											T	T							T	.	.			S	S	S									S													T	T													T	T						T	T							S
Template Predicted Secondary structure																				.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		258																								.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.												.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	V	P	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	.	.	.	.	.	.	.	.	.	.	.	E	Y	D	V	D	V	I	D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		K	L	M	H	Q	A	G	L	L	S	H	A	L	E	D	A	E	H	F	G	W	S	L	D	R	S	K	I	S	H	N	W	S	T	M	V	E	G	V	Q	S	H	I	G	S	L	N	W	G	Y	K	V	A	L	R	D	N	Q	V	T	Y	L	N	A	K	.	.	.	.	G	R	L	I	S	P	H	E	V	Q	I
Template Known Secondary structure																				T	T						T	T																														T	T						S		.	.	.	.				S	S	S	S
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L
Query Conservation
Alig confidence																																						.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		T	D	K	N	Q	K	V	S	T	I	T	G	N	K	I	I	L	A	T	G	E	R	P	K	Y	P	E	I	P	G	A	V	E	Y	G	I	.	.	.	.	T	S	D	D	L	F	S	L	P	Y	F	P	G	K	T	L	V	I	G	A	S	Y	V	A	L	E	C	A	G	F	L	A	S	L	G	G	D	V	T	V
Template Known Secondary structure				T	T																							S	S	T	T						B	.	.	.	.						T	T		S	S				S							S													T	T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		384	.	.	.	.	.	390	.	.	.					.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.								.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure												.	.	.	.																																.	.	.	.	.	.	.
Query SS confidence												.	.	.	.																																.	.	.	.	.	.	.
Query Sequence		L	E	F	A	P	E	M	K	A	D	.	.	.	.	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	.	.	.	.	.	.	.	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N	I	E	L	A	G	I	F	V	Q	I	G	L	L
Query Conservation												.	.	.	.																																.	.	.	.	.	.	.
Alig confidence												.	.	.	.																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	V	R	S	I	L	L	R	G	F	D	Q	Q	M	A	E	K	V	G	D	Y	M	E	N	H	G	V	K	F	A	K	L	C	V	P	D	E	I	K	Q	L	K	V	V	D	T	E	N	N	K	P	G	L	L	L	V	K	G	H	Y	T	D	G	K	K	F	E	E	E	F	E	T	V	I	F	A	V	G	R	E
Template Known Secondary structure				S	S		S	S	T	T	S														T	T	T					T	T													B	T	T	T	T	B											T	T	S								S						S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		453	.	.	.	.	.				.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		P	N	T	N	W	L	.	.	.	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	K	C	E	T	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		P	Q	L	S	K	V	L	C	E	T	V	G	V	K	L	D	K	N	G	R	V	V	C	T	D	D	E	Q	T	T	V	S	N	V	Y	A	I	G	D	I	N	A	G	K	P	Q	L	T	P	V	A	I	Q	A	G	R	Y	L	A	R	R	L	F
Template Known Secondary structure				T	T	T	T	B		T	T	S				B		T	T	S		B				T	T		B		S	S	T	T					G	G	G	B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.