Job Description P35340 Confidence 99.41% Date Wed Jan 25 15:20:51 GMT 2012 Rank 170 Aligned Residues 210 % Identity 16% Template c2rghA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase Resolution 2.30 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.							.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																						.																							.	.	.	.	.	.
Query SS confidence																																						.																							.	.	.	.	.	.
Query Sequence		K	R	D	A	Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	R	.	F	G	G	Q	I	L	D	T	V	D	I	E	N	Y	I	S	V	P	K	T	E	G	.	.	.	.	.	.	Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D
Query Conservation																																						.																							.	.	.	.	.	.
Alig confidence																																						.																							.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	E	E	L	D	L	L	I	I	G	G	G	I	T	G	A	G	V	A	V	Q	A	A	A	S	G	I	K	T	G	L	I	E	X	Q	D	F	A	E	G	T	S	S	R	S	T	K	L	V	H	G	G	I	R	Y	L	K	T	F	D	V	E	V	V	A	D	T	V	G	E	R	A	V	V	Q	G	I	A	P
Template Known Secondary structure				S		B	S							S													T	T								S	S	S	T	T		S	G	G	G	S	S		S						G	G	G	G	G	G	T																				T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	V	I	D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	I	P	K	P	D	P	X	L	L	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	D	E	G	A	T	T	F	N	X	F	S	V	K	V	A	X	D	L	Y	D	K	L	A	N	V	T	G	T	K	Y	E	N	Y	T
Template Known Secondary structure		T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	S	S		S																		T		S	S	S	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.																																	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.			.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		G	G	G	N	S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	Q	V	L	Q	D	.	.	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N
Query Conservation																																							.	.
Alig confidence																																							.	.
Template Conservation
Template Sequence		L	T	P	E	E	V	L	E	R	E	P	F	L	K	K	E	G	L	K	G	A	G	V	Y	L	D	F	R	N	N	D	A	R	L	V	I	D	N	I	K	K	A	A	E	D	G	A	Y	L	V	S	K	X	K	A	V	G	F	L	Y	E	G	D	Q	I	V	G	V	K	A	R	D	L	L	T	D	E	V	I	E
Template Known Secondary structure												T	T	S			T	T																												T	T					S	S										T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	L	A	G	I	F	V	Q	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	A	K	L	V	I	N	T	S	G
Template Known Secondary structure				B	S							G
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions