Job Description P35340 Confidence 100.00% Date Wed Jan 25 15:20:51 GMT 2012 Rank 11 Aligned Residues 308 % Identity 29% Template c2q7vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of deinococcus radiodurans thioredoxin2 reductase Resolution 1.90 Å

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		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		L	N	K	R	D	A	Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	.	R	F	G	G	Q	I	L	D	T	V	D	I	E	N	Y	I	S	V	P	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D	V	D	V	I
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		A	P	T	A	H	D	Y	D	V	V	I	I	G	G	G	P	A	G	L	T	A	A	I	Y	T	G	R	A	Q	L	S	T	L	I	L	E	K	G	M	P	G	G	Q	I	A	W	S	E	E	V	E	N	F	P	G	F	P	E	P	I	A	G	M	E	L	A	Q	R	M	H	Q	Q	A	E	K	F	G	A	K	V
Template Known Secondary structure																S													T	T								S	S		T	T	G	G	G	G	G		S		B			S	T	T		S	S		B																T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	D	E	V	Q	G	V	Q	H	D	A	T	S	H	P	Y	P	F	T	V	R	G	Y	N	G	E	Y	R	A	K	A	V	I	L	A	T	G	A	D	P	R	K	L	G	I	P	G	E	D	N	F	W	G	K	G	V	S	T	C	A	T	C	D	G	F	F	Y	K	G	K	K	V	V	V	I	G	G	G	D
Template Known Secondary structure													T	T	S	S	S								S	S																						T	T	T	T	T	T	B	T	T	T			S						G	G	G	G	T	T									S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N	I	E	L	A	G	I
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		A	A	V	E	E	G	M	F	L	T	K	F	A	D	E	V	T	V	I	H	R	R	D	T	L	R	A	N	K	V	A	Q	A	R	A	F	A	N	P	K	M	K	F	I	W	D	T	A	V	E	E	I	Q	G	A	.	D	S	V	S	G	V	K	L	R	N	L	K	T	G	E	V	S	E	L	A	T	D	G	V
Template Known Secondary structure											T	T	T		S							S	S	S	S			S										T		T	T						S									S	.	S	S									T	T	T									S
Template Predicted Secondary structure																																																									.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	Q	I	G	L	L	P	N	T	N	W	L	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	K	C	E	T	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F	D	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	F	I	G	H	V	P	N	T	A	F	V	K	D	T	V	S	L	R	D	D	G	Y	V	D	V	R	D	E	I	Y	T	N	I	P	M	L	F	A	A	G	D	V	S	D	Y	I	Y	R	Q	L	A	T	S	V	G	A	G	T	R	A	A	M	M	T	E	R	Q	L
Template Known Secondary structure					S					S		G	G	G	T	T	T	S		B		T	T	S		B			B	T	T	T	B		S	S	T	T					S	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions