 |
Job Description | P35340 | Confidence | 100.00% | Date | Wed Jan 25 15:20:51 GMT 2012 |
Rank | 28 | Aligned Residues | 294 |
% Identity | 22% | Template | c2bcpA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:nadh oxidase; |
PDBTitle: structural analysis of streptococcus pyogenes nadh oxidase:2 c44s nox with azide
|
Resolution | 2.10 Å |
|
 |
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
|
. | . | . | . | . | 240 | . | . | . | . | |
|
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | N | K | R | D | A | Y | D | V | L | I | V | G | S | G | P | A | G | A | A | A | A | I | Y | S | A | R | K | . |
. |
. |
G | I | R | T | G | L | M | G | E | R | . |
. |
F | G | G | Q | I | L | D | T | V | D | I | E | N | Y | I | S | V | P | K | T | E | G | Q | K | L | A | G | A | L | K | V | H | V | D | E | Y |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   | . | . | . |
|   |
|
|   |
|
|
|
|   | . | . |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | D | K | D | R | W | G | S | K | I | V | V | V | G | A | N | H | A | G | T | A | C | I | K | T | M | L | T | N | Y | G | D | A | N | E | I | V | V | F | D | Q | N | S | N | I | S | F | L | . |
. |
. |
G | S | G | M | A | L | W | I | G | E | Q | I | A | G | P | E | G | L | F | Y | S | D | K | E | E | L | E | S | L |
Template Known Secondary structure |   |
|
| S | S |
|
|
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |  |  |  |  |  |
| S | S | S |
|
|
| B |
| . | . | . | T | T |  |  |  |  |  |  | T | T | S | S | S | S | S | T | T | S | B |
|
|
|  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|