Job Description P35340 Confidence 100.00% Date Wed Jan 25 15:20:51 GMT 2012 Rank 20 Aligned Residues 303 % Identity 33% Template c2a87A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of m. tuberculosis thioredoxin reductase Resolution 3.00 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																							.																			.
Query SS confidence																																							.																			.
Query Sequence		N	K	R	D	A	Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	R	.	F	G	G	Q	I	L	D	T	V	D	I	E	N	Y	I	S	V	P	.	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D	V	D	V	I
Query Conservation																																							.																			.
Alig confidence																																							.																			.
Template Conservation
Template Sequence		A	H	H	P	V	R	D	V	I	V	I	G	S	G	P	A	G	Y	T	A	A	L	Y	A	A	R	A	Q	L	A	P	L	V	F	E	G	T	S	F	G	G	A	L	M	T	T	T	D	V	E	N	Y	P	G	F	R	N	G	I	T	G	P	E	L	M	D	E	M	R	E	Q	A	L	R	F	G	A	D	L	R
Template Known Secondary structure																												T	T									S	S		S		G	G	G	S		S		B			S	T	T		T	T		B																T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N
Query Conservation
Alig confidence											.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		M	E	D	V	E	S	V	S	L	.	.	.	.	H	G	P	L	K	S	V	V	T	A	D	G	Q	T	H	R	A	R	A	V	I	L	A	M	G	A	A	A	R	Y	L	Q	V	P	G	E	Q	E	L	L	G	R	G	V	S	S	C	A	T	C	D	G	F	F	F	R	D	Q	D	I	A	V	I	G	G	G	D
Template Known Secondary structure											.	.	.	.	S	S	S	S						T	T	S																						T					T	B	T	T	T			S						G	G	G	G	T	T								S	S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N	I	E	L	A	G	I
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		S	A	M	E	E	A	T	F	L	T	R	F	A	R	S	V	T	L	V	H	R	R	D	E	F	R	A	S	K	I	M	L	D	R	A	R	N	N	D	K	I	R	F	L	T	N	H	T	V	V	A	V	D	G	D	.	T	T	V	T	G	L	R	V	R	D	T	N	T	G	A	E	T	T	L	P	V	T	G	V
Template Known Secondary structure											T	T	T		S							S	S	S	S		S	S		T	T									T	T						S									S	.	S	S										T	T	S								S
Template Predicted Secondary structure																																																									.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.		.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		F	V	Q	I	G	L	L	P	N	T	N	W	L	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	.	K	C	E	T	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F	D	Y	L
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		F	V	A	I	G	H	E	P	R	S	G	L	V	R	E	A	I	D	V	D	P	D	G	Y	V	L	V	Q	G	R	T	T	S	T	S	L	P	G	V	F	A	A	G	D	L	V	D	R	T	Y	R	Q	A	V	T	A	A	G	S	G	C	A	A	A	I	D	A	E	R	W	L
Template Known Secondary structure					S							T	T	T	B	T	T	B		B		T	T	S		B			S	T	T	S	S	B		S	S	T	T					G	G	G	T			S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions