Job Description P35340 Confidence 99.97% Date Wed Jan 25 15:20:51 GMT 2012 Rank 79 Aligned Residues 277 % Identity 19% Template c1xhcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh oxidase /nitrite reductase; PDBTitle: nadh oxidase /nitrite reductase from pyrococcus furiosus pfu-1140779-2 001 Resolution 2.35 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	R	F	G	G	Q	I	L	D	T	V	D	I	E	N	Y	I	S	V	P	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D	V	D	V	I	D	S	Q	S	A	S	K	L
Query Conservation
Alig confidence																						.											.	.
Template Conservation																						.											.	.
Template Sequence		K	V	V	I	V	G	N	G	P	G	G	F	E	L	A	K	Q	L	S	Q	.	T	Y	E	V	T	V	I	D	K	E	.	.	P	V	P	Y	Y	S	K	P	M	L	S	H	Y	I	A	G	F	I	P	R	N	R	L	F	P	Y	S	L	D	W	Y	R	K	R	G	I	E	I	R	L	A	E	E	A	K	L	I
Template Known Secondary structure									S											T	T	.	T	S							S	S	.	.	S	S					S	T	T						T	T	S	S		G	G	G	G		S	S									T						S
Template Predicted Secondary structure																						.											.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	.	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	G	V	E	A	A	I
Query Conservation																																														.
Alig confidence							.	.	.	.	.	.																																		.
Template Conservation							.	.	.	.	.	.
Template Sequence		D	R	G	R	K	.	.	.	.	.	.	V	V	I	T	E	K	G	E	V	P	Y	D	T	L	V	L	A	T	G	A	R	A	R	E	P	Q	I	K	G	K	E	Y	L	L	T	L	R	T	I	F	D	A	D	R	I	K	E	S	I	E	N	S	G	E	A	I	I	I	G	G	G	F	I	G	L	E	L	A	G
Template Known Secondary structure			T	T	T	T	.	.	.	.	.	.					S	S						S															S	B	T	G	G	G						S															S								S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.					.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	.	.	.	.	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N	I	E	L	A	G	I	F	V	Q
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	A	E	A	G	Y	H	V	K	L	I	H	R	G	A	M	F	L	G	L	D	E	E	L	S	N	M	I	K	D	M	L	E	E	T	G	V	K	F	F	L	N	S	E	L	L	E	A	N	E	E	G	.	.	.	.	.	.	.	.	.	.	.	V	L	T	N	S	G	F	I	E	G	K	V	K	I	C	A
Template Known Secondary structure						T	T								S	S	S			T	T																T	T						S								S	S		.	.	.	.	.	.	.	.	.	.	.				T	T						S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.												.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.				.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		I	G	L	L	P	N	T	N	W	L	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	K	C	E	T	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	.	.	.	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A
Query Conservation																																															.	.	.
Alig confidence																.																															.	.	.
Template Conservation																.
Template Sequence		I	G	I	V	P	N	V	D	L	A	R	R	S	G	.	I	H	T	G	R	G	I	L	I	D	D	N	F	R	T	S	A	K	D	V	Y	A	I	G	D	C	A	E	Y	S	G	I	I	A	G	T	A	K	A	A	M	E	Q	A	R	V	L	A	D	I	L
Template Known Secondary structure														T	T	.			B	S	S	S					T	T	S	B		S	S	T	T					G	G	G			B	T	T	B				S
Template Predicted Secondary structure																.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions