Job Description P35340 Confidence 100.00% Date Wed Jan 25 15:20:51 GMT 2012 Rank 69 Aligned Residues 311 % Identity 18% Template c1x31A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sarcosine oxidase alpha subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96 Resolution 2.15 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.																														.	.
Query SS confidence																					.	.	.	.	.	.	.																														.	.
Query Sequence		D	T	G	A	E	K	R	A	A	E	E	L	N	K	R	D	A	Y	D	.	.	.	.	.	.	.	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	.	.	R	F	G	G	Q	I	L	D	T	V	D	I	E	N	Y	I	S	V	P	K	T	E	G
Query Conservation																					.	.	.	.	.	.	.																														.	.
Alig confidence																					.	.	.	.	.	.	.																														.	.														.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		T	L	L	S	G	L	G	V	L	D	P	S	E	D	P	A	Y	Y	D	H	V	H	V	H	T	D	V	L	V	V	G	A	G	P	A	G	L	A	A	A	R	E	A	S	R	S	G	A	R	V	M	L	L	D	E	R	P	E	A	G	G	T	L	R	E	A	S	G	E	Q	.	.	.	.	I	D	G	I	D	A
Template Known Secondary structure					S	S						S	S																					S													T	T								S	S	S	S	S		G	G	G	G	G			S			.	.	.	.		T	T
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.													.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D	.	V	D	V	I	D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G
Query Conservation																	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Q	W	I	D	A	V	T	E	E	L	A	A	A	E	E	T	T	H	L	Q	R	T	T	V	F	G	S	Y	D	A	N	Y	I	L	A	A	Q	R	R	T	V	H	L	D	G	P	S	G	Q	G	V	S	R	E	R	I	W	H	I	R	A	K	Q	V	V	L	A	T	A	A	H	E	R	P	I	V	F	E	N
Template Known Secondary structure																T	T					S	S								T	T	T									S	T	T		S	S				T	T			S																									B	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		334	.	.			.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		E	D	Q	.	.	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N
Query Conservation					.	.
Alig confidence					.	.																																																									.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		N	D	R	P	G	I	M	L	A	G	S	V	R	S	Y	L	N	R	F	G	V	R	A	G	S	K	I	A	V	A	T	T	N	D	S	V	Y	P	L	V	S	E	L	A	A	S	G	G	V	V	A	V	I	D	A	R	Q	N	I	S	A	.	.	.	.	A	A	A	Q	A	V	T	D	G	V	T	V	L	T	G
Template Known Secondary structure		T	T	S	T	T																		S		S	S						S	S	G	G	G								G	G	G	T			S						S	S	S				.	.	.	.								T	T					T	T
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		412	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.	.					.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.					.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure											.													.	.	.	.																											.							.	.	.	.
Query SS confidence											.													.	.	.	.																											.							.	.	.	.
Query Sequence		A	Q	T	T	E	V	K	G	D	.	G	S	K	V	V	G	L	E	Y	R	D	R	.	.	.	.	V	S	G	D	I	H	N	I	E	L	A	G	I	F	V	Q	I	G	L	L	P	N	T	N	W	L	.	E	G	A	V	E	R	.	.	.	.	N	R	M	G	E	I	I	I	D	A	K	C	E	T	N	V	K
Query Conservation											.													.	.	.	.																											.							.	.	.	.
Alig confidence											.													.	.	.	.																											.							.	.	.	.								.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.
Template Sequence		S	V	V	A	N	T	E	A	D	A	S	G	E	L	S	A	V	L	V	A	T	L	D	E	Q	R	N	L	G	E	A	Q	R	F	E	A	D	V	L	A	V	S	G	G	F	N	P	V	V	H	L	H	S	Q	R	Q	G	K	L	N	W	D	T	S	I	H	A	F	V	P	.	.	.	.	.	A	D	A	V	A
Template Known Secondary structure											T	T	S	S									B		T	T			B									S																		T	T							T	T	T	T					.	.	.	.	.		S			T
Template Predicted Secondary structure																																																																								.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.						.	.	.	.	410
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F	D	Y	L	I	R	T	K	T	A
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		N	Q	H	L	A	G	A	L	T	G	L	.	.	L	D	T	A	S	A	L	S	T	G	A	A	T	G	A	A	A	A	S	A	A	G	F	E	K	I	A
Template Known Secondary structure		T					G	G	G	G	T		.	.		S																			T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.			.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions