Job Description P35340 Confidence 100.00% Date Wed Jan 25 15:20:51 GMT 2012 Rank 63 Aligned Residues 289 % Identity 20% Template c1ndaD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:trypanothione oxidoreductase; PDBTitle: the structure of trypanosoma cruzi trypanothione reductase2 in the oxidized and nadph reduced state Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.																																.	.	.	.	.	.
Predicted Secondary structure																							.												.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.												.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	.	K	G	I	R	T	G	L	M	G	E	R	.	.	F	G	G	Q	I	L	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	I	E	N	Y
Query Conservation																							.												.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.												.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	L	V	V	I	G	A	G	S	G	G	L	E	A	A	W	N	A	A	T	L	Y	K	K	R	V	A	V	I	D	V	Q	M	V	H	G	P	P	F	F	S	A	L	G	G	T	C	V	N	V	G	C	V	P	K	K	L	M	V	T	G	A	Q	Y	M	E	H	L	R	E	S	A	G	F	G	W	E	F	D
Template Known Secondary structure		B	S							S														S									S		S	S	S	B	T	T	T	B			T	T						S	S																				G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.													280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	V	P	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	E	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	V	D	V	I	D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	T	L	R	A	E	W	K	K	L	I	A	V	K	D	E	A	V	L	N	I	N	K	S	Y	E	E	M	F	R	D	T	E	G	L	E	F	F	L	G	W	G	S	L	E	S	K	N	V	V	N	V	R	E	S	A	D	P	A	S	A	V	K	E	R	L	E	T	E	N	I	L	L	A	S	G	S	W	P
Template Known Secondary structure		T	T	T																												T	T		S	S						S						S	S	S						S	S	S	S	T	T	S								B	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.				.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.						.	.	.	.	.
Predicted Secondary structure																																										.	.	.																												.	.	.	.	.
Query SS confidence																																										.	.	.																												.	.	.	.	.
Query Sequence		R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	.	.	.	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	.	.	.	.	.	Q	V	L	Q	D
Query Conservation																																										.	.	.																												.	.	.	.	.
Alig confidence														.	.	.	.	.																								.	.	.																												.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		H	M	P	N	I	P	G	I	E	H	C	I	.	.	.	.	.	S	S	N	E	A	F	Y	L	P	E	P	P	R	R	V	L	T	V	G	G	G	F	I	S	V	E	F	A	G	I	F	N	A	Y	K	P	K	D	G	Q	V	T	L	C	Y	R	G	E	M	I	L	R	G	F	D	H	T	L	R	E	E	L	T
Template Known Secondary structure							T	T	G	G	G		B	.	.	.	.	.						T	T		S	S			S						S	S	S	T													S		S	S								S	S	S	S	S	S	T	T	S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.			.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N	I	E	L	A	G	I	F	V	Q	I	G	L	L	P	N	T	N	W	L	.	.	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	K	C
Query Conservation																																																														.	.
Alig confidence																																	.	.	.	.	.																									.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		K	Q	L	T	A	N	G	I	Q	I	L	T	K	E	N	P	A	K	V	E	L	N	A	D	G	S	K	S	V	T	F	.	.	.	.	.	E	S	G	K	K	M	D	F	D	L	V	M	M	A	I	G	R	S	P	R	T	K	D	L	Q	L	Q	N	A	G	V	M	I	K	N	G	G	V	Q	V	D	E	Y	S
Template Known Secondary structure							T	T						T										T	T	S							.	.	.	.	.	T	T	S						S						S					T	T	T	T	S		G	G	G	T	T			B	S	S	S	S	B				T	T
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		R	T	N	V	S	N	I	Y	A	I	G	D	V	T	N	R	V	.	M	L	T	P	V	A	I	N	E	A	A	A	L	V	D	T	V	F
Template Known Secondary structure		B		S	S	T	T					T	T	T	T	T	S		.																		T
Template Predicted Secondary structure																			.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions