Job Description P35340 Confidence 99.25% Date Wed Jan 25 15:20:51 GMT 2012 Rank 190 Aligned Residues 197 % Identity 18% Template c1naaB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cellobiose dehydrogenase; PDBTitle: cellobiose dehydrogenase flavoprotein fragment in complex with2 cellobionolactam Resolution 1.80 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	Y	D	Y	I	I	V	G	A	G	P	G	G	I	I	A	A	D	R	L	S	E	A	G	K	K	V	L	L	L	E	R	G	G	P	S	T	K	Q	T	G	G	T	Y	V	A	P	W	A	T	S	S	G	L	T	K	F	D	I	P	G	L	F	E	S	L	F	T	D	S	N	P	F	W	W	C	K	D	I
Template Known Secondary structure												S													T	T								S	S				S	G	G	G	T						G	G	G	T	T	T	T			T	T	T		G	G	G	G	G	G	G	G	S		S	S		T	T	B		T	T	B
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
									245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.									.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	F	G	G	Q	I	L	D	T	V	D	I	E	N	Y	I	S	V	.	.	.	.	.	.	.	.	P	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D	V	D	V	I	D	S	Q	S	A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S
Query Conservation		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	F	A	G	C	L	V	G	G	G	T	S	V	N	G	A	L	Y	W	Y	P	N	D	G	D	F	S	S	S	V	G	W	P	S	S	W	T	N	H	A	P	Y	T	S	K	L	S	S	R	L	P	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S			B		S	T	T	G	G	G	G	T	S			B						G	G	G	G		G	G	G	T			G	G	G	S													S			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	P	S	T	D	G	Q	R	Y	L	E	Q	S	F	N	V	V	S	Q	L	L	K	G	Q	G	Y	N	Q	A	T	I	N	D	N	P	N	Y	K	D	H	V	F	G	Y	S	A	F	D	.	.	.	.	.	F	L	N	G	K	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S	T	T	S				S													T	T	T						G	G	G		T	T			T	T							B		.	.	.	.	.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Template SS confidence
																						349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.						.	.	400	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.				.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		M	K	A	D	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	.	.	.	V	S	G	D	I	H	N	I	E	L	A	G	I	F	V	Q	I	G	L	L	P	N	T	N	W	L
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.
Template Conservation
Template Sequence		A	G	P	V	A	T	Y	L	Q	T	A	L	A	R	P	N	F	T	F	K	T	N	V	M	V	S	N	V	V	R	N	G	S	Q	I	L	G	V	Q	T	N	D	P	T	L	G	P	N	G	F	I	P	V	T	P	K	G	R	V	I	L	S	A	G	A	F	G	T	S	R	I	L
Template Known Secondary structure							T							T		T	T						S										T	T								S		T	T	S	S	G	G	G														S
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions