 |
Job Description | P37590 | Confidence | 3.91% | Date | Thu Jan 5 11:55:39 GMT 2012 |
Rank | 38 | Aligned Residues | 28 |
% Identity | 11% | Template | d1vpka2 |
SCOP info | DNA clamp
| DNA clamp
| DNA polymerase III, beta subunit
|
Resolution | 2.00 |
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | F | A | V | K | V | G | D | L | L | S | P | L | Q | N | A | L | Y | C | I | N | R | E | K | L | H | T | V |
Query Conservation |   |
  |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
Template Sequence |   |
T | F | E | V | D | T | S | L | L | E | E | M | V | E | K | V | I | F | A | A | A | K | D | E | F | M | R | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |
|
|
| T | T |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|