 |
Job Description | P37590 | Confidence | 2.39% | Date | Thu Jan 5 11:55:39 GMT 2012 |
Rank | 95 | Aligned Residues | 47 |
% Identity | 26% | Template | c3lkzB_ |
PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:non-structural protein 5; |
PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase
|
Resolution | 2.00 Å |
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | M | L | C | D | A | G | G | A | I | K | M | I | A | E | V | K | S | D | F | A | V | K | V | G | D | L | L | S | P | L | Q | N | A | L | Y | C | I | N | R | E | K | L | H | T | V | K | V | L | S | A | S | S |
Query Conservation |   |
|   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
| . |
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |
|   | . | . | . | . | . |
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |
Template Sequence |   |
T | L | L | C | D | I | G | E | S | . |
S | S | S | A | E | V | E | E | H | R | T | I | R | V | L | E | M | V | . |
. |
. |
. |
. |
E | D | W | L | H | R | G | P | R | E | F | C | V | K | V | L | C | P | Y | M |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
|
| . |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  | S |
| T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | |
. | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|