Job Description P60546 Confidence 98.45% Date Thu Jan 5 12:06:52 GMT 2012 Rank 137 Aligned Residues 154 % Identity 18% Template d1viaa_ SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Shikimate kinase (AroK) Resolution 1.57

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	Y	I	V	S	A	P	S	G	A	G	K	S	S	L	I	Q	A	L	L	K	T	Q	P	L	Y	D	T	Q	V	S	V	S	H	T	T	R	Q	P	R	P	G	E	V	H	G	E	H	Y	F	F	V	N	H	D	E	F	K	E	M	I	S	R	D	A	F	L	E	H	A	E	V	F	G	N	Y	Y	G	T
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	I	V	F	I	G	F	X	G	S	G	K	S	T	L	A	R	A	L	A	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	L	V	F	L	D	S	D	F	L	I	E	Q	K	F	N	Q	K	V	S	E	I	F	E	Q	K	R	E	N	F	F	R
Template Known Secondary structure										T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T															T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.																									.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		S	R	E	A	I	E	Q	V	L	A	T	G	V	D	V	F	L	D	I	D	W	Q	G	A	Q	Q	I	R	Q	K	M	P	H	A	R	S	I	F	I	L	P	P	S	K	I	E	L	D	R	R	L	R	G	R	G	Q	D	.	.	.	.	S	E	E	V	I	A	K	R	M	A	Q	A	V	A	E	M	S	H	Y
Query Conservation																																																											.	.	.	.
Alig confidence																			.																																								.	.	.	.
Template Conservation																			.
Template Sequence		E	Q	E	Q	K	X	A	D	F	F	S	S	C	E	K	A	C	.	I	A	T	G	G	G	F	V	N	V	S	N	L	E	K	A	G	F	C	I	Y	L	K	A	D	F	E	Y	L	K	K	R	L	D	K	D	E	I	S	K	R	P	L	F	Y	D	E	I	K	A	K	K	L	Y	N	E	R	L	S	K	Y	E
Template Known Secondary structure												T	T			S			.					T	T	G	G	G	S	T	T	G	G	G	G														T	T				G	G	G	T	T	T	S		T	T
Template Predicted Secondary structure																			.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		A	E	Y	D	Y	L	I	V	N	D	.	.	D	F	D	T	A	L	T	D	L	K	T	I	I
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		Q	K	A	N	F	I	L	N	I	E	N	K	N	I	D	E	L	L	S	E	I	K	K	V	I
Template Known Secondary structure					S						T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions