Return to main results Retrieve Phyre Job Id

Job DescriptionP60546
Confidence98.97%DateThu Jan 5 12:06:52 GMT 2012
Rank90Aligned Residues174
% Identity16%Templated1vhta_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution1.59

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60........
Predicted Secondary structure 


























............
Query SS confidence 



































































. . . . . . . . . . . .
Query Sequence  MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISR. . . . . . . . . . . .
Query Conservation 

 
 

 
 
  






   
        
 
 
                        
      ............
Alig confidence 


..





















......


































............
Template Conservation 
  ..

 
 
  







  
   ......
   
  
   
                                
  
Template Sequence  LRY. . IVALTGGIGSGKSTVANAFADL. . . . . . GINVIDADIIARQVVEPGAPALHAIADHFGANMIAADGTLQRRALRE
Template Known Secondary structure 

..

TTS
T......T
TTSTT
T
GGGB
TTS
B
Template Predicted Secondary structure 

..






......















Template SS confidence 















































































   1.. ......10.........20..... ....30.........40.........50.........60.........70..
 
   6970.........80.........90.........100.........110.........120.........130.........140.....
Predicted Secondary structure  ...






























Query SS confidence  . . .












































































Query Sequence  . . . DAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEV
Query Conservation  ...                                                              
   
          
Alig confidence  ...









































.

































Template Conservation                                               .                      
   
       
Template Sequence  RIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVE. NSLYKKANRVLVVDVSPETQLKRTMQRDDVTREH
Template Known Secondary structure  T


SS
TTTTT.TTGGGG
S

T

Template Predicted Secondary structure 










.












Template SS confidence 















































































   73......80.........90.........100.........110....... ..120.........130.........140.........150.
 
   146...150.........160.........170 .........180...
Predicted Secondary structure 





.
Query SS confidence 
























.












Query Sequence  IAKRMAQAVAEMSHYAEYDYLIVND. DFDTALTDLKTII
Query Conservation 
         
         

   . 
  
      

Alig confidence 
























.












Template Conservation     
             

 



    
     
  
 
Template Sequence  VEQILAAQATREARLAVADDVIDNNGAPDAIASDVARLH
Template Known Secondary structure  S


S
SS
TTS
Template Predicted Secondary structure 








Template SS confidence 






































   152.......160.........170.........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions