Job Description P60546 Confidence 98.80% Date Thu Jan 5 12:06:52 GMT 2012 Rank 105 Aligned Residues 159 % Identity 21% Template d1e6ca_ SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Shikimate kinase (AroK) Resolution 1.8

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		M	A	Q	G	T	L	Y	I	V	S	A	P	S	G	A	G	K	S	S	L	I	Q	A	L	L	K	T	Q	P	L	Y	D	T	Q	V	S	V	S	H	T	T	R	Q	P	R	P	G	E	V	H	G	E	H	Y	F	F	V	N	H	D	E	F	K	E	M	I	S	R	D	A	F	L	E	H	A	E	V	F	G	.
Query Conservation																																																																																	.
Alig confidence						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	E	P	.	.	I	F	M	V	G	A	R	G	C	G	M	T	T	V	G	R	E	L	A	R	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	E	F	V	D	T	D	I	F	M	Q	H	T	S	G	M	T	V	A	D	V	V	A	A	E	G	W
Template Known Secondary structure						.	.					S		T	T	S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																S
Template Predicted Secondary structure						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.																									.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.																																																																.	.	.	.	.	.
Query SS confidence		.																																																																.	.	.	.	.	.
Query Sequence		.	N	Y	Y	G	T	S	R	E	A	I	E	Q	V	L	A	T	G	V	D	V	F	L	D	I	D	W	Q	G	A	Q	Q	I	R	Q	K	M	P	H	A	R	S	I	F	I	L	P	P	S	K	I	E	L	D	R	R	L	R	G	R	G	Q	D	S	.	.	.	.	.	.	E	E	V	I	A	K	R	M	A	Q
Query Conservation		.																																																																.	.	.	.	.	.
Alig confidence		.																																																																.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	F	R	R	R	E	S	E	A	L	Q	A	V	A	T	P	N	R	V	V	A	T	G	G	G	M	V	L	L	E	Q	N	R	Q	F	M	R	A	H	G	T	V	V	Y	L	F	A	P	A	E	E	L	A	L	R	L	Q	A	S	L	Q	A	H	Q	R	P	T	L	T	G	R	P	I	A	E	E	M	E	A
Template Known Secondary structure																		S	S							T	T	G	G	G	S											S																						S						T	T
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		153	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure										.	.											.
Query SS confidence										.	.											.
Query Sequence		A	V	A	E	M	S	H	Y	.	.	A	E	Y	D	Y	L	I	V	N	D	.	D	F	D	T	A	L	T	D	L	K	T	I	I	R	A
Query Conservation										.	.											.
Alig confidence										.	.											.
Template Conservation
Template Sequence		V	L	R	E	R	E	A	L	Y	Q	D	V	A	H	Y	V	V	D	A	T	Q	P	P	A	A	I	V	C	E	L	M	Q	T	M	R	L
Template Known Secondary structure															S					T	T	S													T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions