Job Description P60546 Confidence 99.72% Date Thu Jan 5 12:06:52 GMT 2012 Rank 68 Aligned Residues 178 % Identity 24% Template c3uatA_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:disks large homolog 1; PDBTitle: guanylate kinase domains of the maguk family scaffold proteins as2 specific phospho-protein binding modules Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		Y	I	V	S	A	P	S	G	A	G	K	S	S	L	I	Q	A	L	L	K	T	Q	P	L	Y	D	T	Q	V	S	V	S	H	T	T	R	Q	P	R	P	G	E	V	H	G	E	H	Y	F	F	V	.	N	H	D	E	F	K	E	M	I	S	R	D	A	F	L	E	H	A	E	V	F	G	N	Y	Y	G	T	S
Query Conservation																																																					.
Alig confidence								.	.	.															.																												.
Template Conservation								.	.	.															.
Template Sequence		V	I	I	L	G	P	.	.	.	M	K	D	R	V	N	D	D	L	I	S	E	F	P	.	D	K	F	G	S	C	V	P	H	T	T	R	P	K	R	D	Y	E	V	D	G	R	D	Y	H	F	V	T	S	R	E	Q	M	E	K	D	I	Q	E	H	K	F	I	E	A	G	Q	Y	N	N	H	L	Y	G	T	S
Template Known Secondary structure						S	T	.	.	.	T													T	.	T	T										S				T	T			T	T	T	S					S											T	T									T	T
Template Predicted Secondary structure								.	.	.															.
Template SS confidence
		724	.	.	.	.	.				730	.	.	.	.	.	.	.	.	.	740	.	.	.		.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		R	E	A	I	E	Q	V	L	A	T	G	V	D	V	F	L	D	I	D	W	Q	G	A	Q	Q	I	R	Q	K	M	P	H	A	R	S	I	F	I	L	P	P	S	K	I	E	L	D	R	R	L	R	G	R	G	Q	D	S	E	E	V	I	A	K	R	M	A	Q	A	V	A	.	E	M	S	H	Y	A	E	Y	D
Query Conservation																																																																								.
Alig confidence																																																			.	.	.																			.
Template Conservation																																																			.	.	.
Template Sequence		V	Q	S	V	R	A	V	A	E	K	G	K	H	C	I	L	D	V	S	G	N	A	I	K	R	L	Q	I	A	Q	L	Y	P	I	S	I	F	I	K	P	K	S	M	E	N	I	M	E	M	.	.	.	N	K	R	L	T	D	E	Q	A	R	K	T	F	E	R	A	V	R	L	E	Q	E	F	T	E	H	F	T
Template Known Secondary structure										T	T	T									T									T	T											S									.	.	.		T	T																					G	G	G		S
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.				.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	I	V	N	D	D	F	D	T	A	L	T	D	L	K	T	I	I	R	A	E	R	L	R	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	V	Q	G	D	T	L	E	D	I	Y	N	Q	V	K	Q	I	I	E	E	Q	S	G	P	Y	I
Template Known Secondary structure							S	S																	S	S
Template Predicted Secondary structure
Template SS confidence
		877	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions