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Job DescriptionP60546
Confidence99.73%DateThu Jan 5 12:06:52 GMT 2012
Rank67Aligned Residues167
% Identity14%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNY
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Template Sequence  RKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT. . . . . . . . . . . VAYKPQYIKAEYEGTVYELLSKIDSSKLNS
Template Known Secondary structure  TT


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   366...370.........380.........390.........400.... .....410.........420.........430....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  YGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYA
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Template Sequence  NFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIY. . . . . . . LLDEPSAYLDVEQRLAVSRAIRHLMEKN
Template Known Secondary structure  TT
TTTTTSBGGG

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   435....440.........450.........460.........470......... 480.........490.........500.......
 
   162.......170.........180......
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Query Sequence  EYDYLIVNDDFDTALTDLKTIIRAE
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Template Sequence  EKTALVVEHDVLMIDYVSDRLIVFE
Template Known Secondary structure  T

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   508.510.........520.........530..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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