Job Description P60546 Confidence 99.61% Date Thu Jan 5 12:06:52 GMT 2012 Rank 71 Aligned Residues 179 % Identity 22% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		Y	I	V	S	A	P	S	G	A	G	K	S	S	L	I	Q	A	L	L	K	T	Q	P	L	Y	D	T	Q	V	S	V	S	H	T	T	R	Q	P	R	P	G	E	V	H	G	E	H	Y	F	F	V	.	N	H	D	E	F	K	E	M	I	S	R	D	A	F	L	E	H	A	E	V	F	G	N	Y	Y	G	T	S
Query Conservation																																																					.
Alig confidence								.	.	.															.																												.
Template Conservation								.	.	.															.
Template Sequence		I	I	I	L	G	P	.	.	.	T	K	D	R	A	N	D	D	L	L	S	E	F	P	.	D	K	F	G	S	C	V	P	H	T	T	R	P	K	R	E	Y	E	I	D	G	R	D	Y	H	F	V	S	S	R	E	K	M	E	K	D	I	R	A	H	K	F	I	E	A	G	Q	Y	N	S	H	L	Y	G	T	S
Template Known Secondary structure						S	T	.	.	.	T													S	.	T	T										S				T	T			T	T	T	T					S												T									T	T
Template Predicted Secondary structure								.	.	.															.
Template SS confidence
		534	.	.	.	.	.				540	.	.	.	.	.	.	.	.	.	550	.	.	.		.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	A	I	E	Q	V	L	A	T	G	V	D	V	F	L	D	I	D	W	Q	G	A	Q	Q	I	R	Q	K	M	P	H	A	R	S	I	F	I	L	P	P	S	K	I	E	L	D	R	R	L	R	G	R	G	Q	D	S	E	E	V	I	A	K	R	M	A	Q	A	V	A	E	M	S	H	Y	A	E	Y	D	Y
Query Conservation
Alig confidence																																																																						.	.
Template Conservation																																																																						.	.
Template Sequence		V	Q	S	V	R	E	V	A	E	Q	G	K	H	C	I	L	D	V	S	A	N	A	V	R	R	L	Q	A	A	H	L	H	P	I	A	I	F	I	R	P	R	S	L	E	N	V	L	E	I	N	K	R	I	T	E	E	Q	A	R	K	A	F	D	R	A	T	K	L	.	.	E	Q	E	F	T	E	C	F	S	A
Template Known Secondary structure											T	T									T	T									T											S	S									T	T	S																.	.				S	S	T	T		S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.			.	.	680	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	V	N	D	D	F	D	T	A	L	T	D	L	K	T	I	I	R	A	E	R	L	R	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	E	G	D	S	F	E	E	I	Y	H	K	V	K	R	V	I	E	D	L	S	G	P	Y	I
Template Known Secondary structure						S	S																S		S
Template Predicted Secondary structure
Template SS confidence
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions