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Job DescriptionP60546
Confidence98.44%DateThu Jan 5 12:06:52 GMT 2012
Rank138Aligned Residues167
% Identity11%Templatec2ql6H_
PDB info PDB header:signaling protein,transferaseChain: H: PDB Molecule:nicotinamide riboside kinase 1; PDBTitle: human nicotinamide riboside kinase (nrk1)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYY
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Template Sequence  KTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALN. . . . . . . . . . . . . . . . . XE
Template Known Secondary structure 

STTSSSTTGGGGB

GGG

B
TTS
B

SSGGGB
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   2.......10.........20.........30.........40.........50.........60.. ..
 
   83......90.........100.........110.........120.........130.........140. ........150.....
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Query Sequence  GTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQD. . . . . . . SEEVIAKRMAQAVA
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Template Sequence  KXXSAISCWXESARHIPILIIEGFLLFNYKPLDTIWNRSYFLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPXYLKYRQ
Template Known Secondary structure  T



SS
TT
TT
S

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TTT
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   156...160........ .170.........180......
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Query Sequence  EMSHYAEYDYLIV. NDDFDTALTDLKTIIRAE
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Template Sequence  EXQDITWEVVYLDGTKSEEDLFLQVYEDLIQE
Template Known Secondary structure  TTTT

S
TTS
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   157..160.........170.........180........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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