Job Description P60546 Confidence 98.84% Date Thu Jan 5 12:06:52 GMT 2012 Rank 102 Aligned Residues 181 % Identity 10% Template c2plrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:probable thymidylate kinase; PDBTitle: crystal structure of dtmp kinase (st1543) from sulfolobus tokodaii2 strain7 Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		Q	G	T	L	Y	I	V	S	A	P	S	G	A	G	K	S	S	L	I	Q	A	L	L	K	T	Q	P	L	Y	D	T	Q	V	S	V	S	H	T	T	R	Q	P	.	R	P	G	E	V	H	G	E	H	Y	F	F	V	N	H	D	E	F	K	E	M	I	S	R	D	A	F	L	E	H	A	E	V	F	G	N	Y
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		K	G	V	L	I	A	F	E	G	I	D	G	S	G	K	S	S	Q	A	T	L	L	K	D	W	I	E	L	K	R	D	V	Y	L	T	E	S	D	W	I	H	D	I	I	K	E	A	K	K	K	D	L	L	T	P	L	T	F	S	L	I	H	A	T	D	F	S	D	R	Y	E	R	Y	I	L	P	X	L	K	S
Template Known Secondary structure												T	T	S	S													T	T	T	S																				T	T																						T							T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	T	S	R	E	A	I	E	Q	V	L	A	T	G	V	D	V	F	L	D	I	D	W	Q	G	A	Q	Q	I	R	Q	K	M	P	H	A	R	S	I	F	I	L	P	P	S	K	I	E	L	D	R	R	L	R	G	R	G	Q	D	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	I	V	I	S	D	R	Y	I	Y	T	A	Y	A	R	D	S	V	R	G	V	D	I	D	W	V	K	K	L	Y	S	F	A	I	K	P	D	I	T	F	Y	I	R	V	S	P	D	I	A	L	E	R	I	K	K	S	K	R	K	I	K	P	Q	E	A	G	A	D	I	F	P	G	L	S	P	E	E	G	F
Template Known Secondary structure		T						S	S											T	T	T										T	T	T	S				S																	T	T	T	T					T	T	T	T	T	T	T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	I	A	K	R	M	A	Q	A	V	A	E	M	S	H	Y	A	E	Y	D	Y	L	I	V	N	D	D	F	D	T	A	L	T	D	L	K	T	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	Y	Q	G	L	I	T	E	V	Y	D	K	L	V	K	D	E	N	F	I	V	I	D	G	T	K	T	P	K	E	I	Q	I	Q	I	R	K	F	V
Template Known Secondary structure																T	T	T	T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions