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Job DescriptionP60546
Confidence99.93%DateThu Jan 5 12:06:52 GMT 2012
Rank4Aligned Residues196
% Identity12%Templatec1q1bD_
PDB info PDB header:transport proteinChain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNY
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Template Sequence  HEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAK
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TT

SGGGSTTTSS


SSTT
TT

SSTT



B
S




TTS
TTTTTTSSSST
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  YGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYA
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Template Sequence  KEVINQRVNQV. . AEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFL. LDEPLSNLDAALRVQMRIEISRLHKRL
Template Known Secondary structure  TTTTTTT..TGGGT
TT
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GGGTTTSSSSTTTT

S
.BSSTTTT

TTTT
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   107..110....... ..120.........130.........140.........150...... ...160.........170.........180...
 
   162.......170.........180.........190.........200
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Query Sequence  EYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDAL
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Template Sequence  GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELY
Template Known Secondary structure  T

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STT
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   184.....190.........200.........210.........220..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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