Job Description P60546 Confidence 99.68% Date Thu Jan 5 12:06:52 GMT 2012 Rank 70 Aligned Residues 183 % Identity 23% Template c1kjwA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:postsynaptic density protein 95; PDBTitle: sh3-guanylate kinase module from psd-95 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		A	Q	G	T	L	Y	I	V	S	A	P	S	G	A	G	K	S	S	L	I	Q	A	L	L	K	T	Q	P	L	Y	D	T	Q	V	S	V	S	H	T	T	R	Q	P	R	P	G	E	V	H	G	E	H	Y	F	F	V	.	N	H	D	E	F	K	E	M	I	S	R	D	A	F	L	E	H	A	E	V	F	G	N
Query Conservation																																																										.
Alig confidence																	.	.	.																	.																						.
Template Conservation																	.	.	.																	.
Template Sequence		H	Y	A	R	P	I	I	I	L	G	P	T	K	D	R	.	.	.	A	N	D	D	L	L	S	E	F	P	D	K	F	G	S	C	.	V	P	H	T	T	R	P	K	R	E	Y	E	I	D	G	R	D	Y	H	F	V	S	S	R	E	K	M	E	K	D	I	Q	A	H	K	F	I	E	A	G	Q	Y	N	S	H
Template Known Secondary structure			S								S	T	T				.	.	.										T	T	T					.						S				T	T			B	T	T	T	B				S											T	T									T	T
Template Predicted Secondary structure																	.	.	.																	.
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.				.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.		.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		Y	Y	G	T	S	R	E	A	I	E	Q	V	L	A	T	G	V	D	V	F	L	D	I	D	W	Q	G	A	Q	Q	I	R	Q	K	M	P	H	A	R	S	I	F	I	L	P	P	S	K	I	E	L	D	R	R	L	R	G	R	G	Q	D	S	E	E	V	I	A	K	R	M	A	Q	A	V	A	.	E	M	S	H
Query Conservation																																																																													.
Alig confidence																																																								.	.	.																			.
Template Conservation																																																								.	.	.
Template Sequence		L	Y	G	T	S	V	Q	S	V	R	E	V	A	E	Q	G	K	H	C	I	L	D	V	S	A	N	A	V	R	R	L	Q	A	A	H	L	H	P	I	A	I	F	I	R	P	R	S	L	E	N	V	L	E	I	.	.	.	N	K	R	I	T	E	E	Q	A	R	K	A	F	D	R	A	T	K	L	E	Q	E	F
Template Known Secondary structure																T	T									T	T								T	T											S	S								.	.	.		T	T	S
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.				.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	E	Y	D	Y	L	I	V	N	D	D	F	D	T	A	L	T	D	L	K	T	I	I	R	A	E	R	L	R	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	C	F	S	A	I	V	E	G	D	S	F	E	E	I	Y	H	K	V	K	R	V	I	E	D	L	S	G	P	Y	I
Template Known Secondary structure		G	G	G		S						S	S																S		S
Template Predicted Secondary structure
Template SS confidence
		685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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