Job Description P0A894 Confidence 96.71% Date Thu Jan 5 11:07:13 GMT 2012 Rank 114 Aligned Residues 130 % Identity 17% Template c3ld9D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase from ehrlichia chaffeensis at2 2.15a resolution Resolution 2.15 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.																										.	.	.
Predicted Secondary structure																							.	.	.	.	.	.												.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.												.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	L	E	D	.	.	.	.	.	.	M	G	F	Y	C	V	D	N	L	P	V	.	.	.	.	.	.	V	L	L	P	D	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	A
Query Conservation																							.	.	.	.	.	.												.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.												.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	T	F	E	G	I	D	G	S	G	K	T	T	Q	S	H	L	L	A	E	Y	L	S	E	I	Y	G	V	N	N	V	V	L	T	R	E	P	G	G	T	L	L	N	E	S	V	R	N	L	L	F	K	A	Q	G	L	D	S	L	S	E	L	L	F	F	I	A	M	R	R	E	H	F	V	K	I	I	K	P
Template Known Secondary structure								S	T	T	S	S																		G	G	G						S	S		S	S													S																							T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		46	.	.	.	50	.	.	.	.	.	.											.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	E	I	S	A	A	V	S	I	D	.	.	.	.	.	.	.	.	.	.	V	R	N	M	P	E	S	P	E	I	F	E	Q	A	M	S	N	L	P	D	A	F	S	P	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R	Y	S	D	T	R	R	L	H	P	L	S	S	K	N	L	S	L	E	S	A
Query Conservation													.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	M	Q	K	K	I	V	I	C	D	R	F	I	D	S	T	I	A	Y	Q	G	Y	G	Q	G	I	D	C	S	L	I	D	Q	L	N	D	L	V	I	D	V	Y	P	D	I	T	F	I	I	D	V	D	D	M	E	F	Y	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T							S										T	T	T	T																S				S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		I	D	K	E	S	D	L	L	E	P	L	R	S	R	A	D	L	I	V	D	T	S	E	M	.	S	V	H	E	L	A	E	M	L	R	T	R	L
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		V	R	D	G	F	Y	D	I	A	K	K	N	P	H	R	C	H	V	I	T	T	Y	D	I	D	D	I	N	F	V	H	L	E	V	I	K	V	L
Template Known Secondary structure														T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions