Job Description P0A894 Confidence 99.32% Date Thu Jan 5 11:07:13 GMT 2012 Rank 1 Aligned Residues 139 % Identity 18% Template c3h0kA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0200 protein sso1041; PDBTitle: crystal structure of an adenylated kinase related protein from2 sulfolobus solfataricus to 3.25a Resolution 3.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																												.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	L	E	D	M	G	F	Y	C	V	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	V	V	L	L	P	D	L	A	R	T	L	A	D	R	E	I	S	A	A	V	S
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	I	L	I	T	G	M	P	G	S	G	K	S	E	F	A	K	L	L	K	E	R	G	A	K	V	I	V	M	S	D	V	V	R	K	R	Y	S	I	E	A	G	E	R	L	M	D	F	A	K	R	L	R	E	I	Y	G	D	G	V	V	A	R	L	C	V	E	E	L	G	T	S	N	H	D	L	V	V	F
Template Known Secondary structure										T	T	S												T	S															T	T					S												T		T	T										S		S				S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		I	D	V	R	N	M	P	E	S	P	E	I	F	E	Q	A	M	S	N	L	P	D	A	F	S	P	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R	Y	S	D	T	R	R	L	H	P	L	S	S	K	N	L	S	L	E	S	A	I	D	K	E	S	D	L	.	L	E	P	L	R	S	R	A	D	L	I
Query Conservation																																																																						.
Alig confidence															.	.	.	.	.	.																										.							.	.	.	.														.
Template Conservation															.	.	.	.	.	.																										.							.	.	.	.
Template Sequence		D	G	V	R	S	L	A	E	V	E	E	F	K	.	.	.	.	.	.	R	L	L	G	D	S	V	Y	I	V	A	V	H	S	P	P	K	I	R	Y	K	R	M	I	E	.	R	L	S	K	E	I	.	.	.	.	S	E	L	I	R	R	D	R	E	E	L	K	L	G	I	G	E	V	I	A	M	A	D	Y	I
Template Known Secondary structure						S									.	.	.	.	.	.					S																				T	.					S		.	.	.	.														T							T		S
Template Predicted Secondary structure															.	.	.	.	.	.																										.							.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	S	E	M	S	V	H	E	L	A	E	M	L	R	T	R	L
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		I	T	N	D	S	.	N	Y	E	E	F	K	R	R	C	E	E	V	T
Template Known Secondary structure					S	S	.
Template Predicted Secondary structure							.
Template SS confidence
		164	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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