Job Description P0A894 Confidence 84.50% Date Thu Jan 5 11:07:13 GMT 2012 Rank 395 Aligned Residues 79 % Identity 15% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																	.	.	.	.	.										.	.	.	.
Query SS confidence																	.	.	.	.	.										.	.	.	.
Query Sequence		V	L	M	I	V	S	G	R	S	G	S	G	K	S	V	.	.	.	.	.	A	L	R	A	L	E	D	M	G	.	.	.	.	F	Y	C	V	D	N	L	P	V	V	L	L	P	D	L	A	R	T	L	A	D	R	E	I	S	A	A	V	S	I	D	V	R	N	M	P	E	S	P	E	I	F	E	Q	A	M	S
Query Conservation																	.	.	.	.	.										.	.	.	.
Alig confidence																	.	.	.	.	.						.				.	.	.	.																					.	.
Template Conservation																											.																												.	.
Template Sequence		Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	.	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	.	.	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H
Template Known Secondary structure										T	T	S	S														.		T	T										T	T														.	.		T	T							S	T	T
Template Predicted Secondary structure																											.																												.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		73	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	P	D	A	F	S	P	Q	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	R	G	I	D	V	V	L	I
Template Known Secondary structure						T		S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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