Job Description P0A894 Confidence 97.32% Date Thu Jan 5 11:07:13 GMT 2012 Rank 109 Aligned Residues 128 % Identity 20% Template c3c8uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:fructokinase; PDBTitle: crystal structure of putative fructose transport system kinase2 (yp_612366.1) from silicibacter sp. tm1040 at 1.95 a resolution Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																															.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	L	E	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	Y	C	V	D	N	L	P	V	V	L	L	P	D	L	A	R	T	L	A	D	R	E	I	S	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	V	A	L	S	G	A	P	G	S	G	K	S	T	L	S	N	P	L	A	A	A	L	S	A	Q	G	L	P	A	E	V	V	P	X	D	G	F	H	L	D	N	R	L	L	E	P	R	G	L	L	P	R	K	G	A	P	E	T	F	D	F	E	G	F	Q	R	L	C	H	A	L	K	H	Q	E	R	V	I
Template Known Secondary structure										T	T	S		T														T	T								S	G	G	G	B							G	G	G	T		G	G	G	T	T	S	G	G	G	B																S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	S	I	D	V	R	N	M	P	E	S	P	E	I	F	E	Q	A	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	P	D	A	F	S	P	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R	Y	S	D	T	R	R	L	H	P	L	S	S	K	N	L	S	L	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.				.	.
Template Conservation																																																																		.	.	.				.	.
Template Sequence		Y	P	L	F	D	R	A	R	D	I	A	I	A	G	A	A	E	V	G	P	E	C	R	V	A	I	I	E	G	N	Y	L	L	F	D	A	P	G	W	R	D	L	T	A	I	W	D	V	S	I	R	L	E	V	P	X	A	D	L	E	A	R	L	V	.	.	.	Q	R	W	.	.	L	D	H	G	L	N	H	D
Template Known Secondary structure							T	T	T	T											T	T									S	S	T	T	B		S	T	T	G	G	G	G	G	G	T		S																		.	.	.				.	.			T	T
Template Predicted Secondary structure																																																																		.	.	.				.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.			.	170	.	.	.	.	.	.
		114	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.
Query Sequence		S	A	I	D	.	.	.	.	.	.	.	K	E	S	D	L	L	E	P	L	R	S	R	A	D	L	I	V
Query Conservation						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	V	A	R	A	Q	G	N	D	L	A	N	A	R	A	I	E	A	A	R	L	P	A	D	L	T	W
Template Known Secondary structure									T											T	T	B				S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions