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Job DescriptionP0A894
Confidence98.14%DateThu Jan 5 11:07:13 GMT 2012
Rank66Aligned Residues147
% Identity24%Templatec3asyB_
PDB info PDB header:transferaseChain: B: PDB Molecule:uridine kinase; PDBTitle: ligand-free structure of uridine kinase from thermus thermophilus hb8
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.. .......30.........40.........50....
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Query Sequence  LMIVSGRSGSGKSVALRALE. . . . . . . . . . . . . . . . . . . . . . . . . . . . DMGFYCVDNLPVVLLPDLARTLADREISAAVS
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Template Sequence  VIGIAGGTASGKTTLAQALARTLGERVALLPMDHYYKDLGHLPLEERLRVNYDHPDAFDLALYLEHAQALLRGLPVEMPV
Template Known Secondary structure 
TTSSGGGGGG
B


TTS
TTSSSSS
TTSGGGB
TT

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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   55....60...... ...70.........80.........90.........100.........110......
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Query Sequence  IDVRNMPESPEI. . . . . . . . . . . . . FEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAI. . . . .
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Template Sequence  YDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIR. . RLKRDV. . LERGRSLEGVVAQYLE
Template Known Secondary structure  TTTT


SSTTTTSSTT
S

....TS


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   88.90.........100.........110.........120.........130.........140. ...... ..150.........160...
 
   117..120.........130.........140.........150...
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Query Sequence  . . . DKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLL
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Template Sequence  QVKPMHLHFVEPTKRYADVIVPRGGQNPVALEMLAAKALA
Template Known Secondary structure  TTTGGGGGG
SSTTS
T
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   164.....170.........180.........190.........200...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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