 |
| Job Description | P0A894 | | Confidence | 79.85% | Date | Thu Jan 5 11:07:13 GMT 2012 |
| Rank | 490 | Aligned Residues | 18 |
| % Identity | 33% | Template | c2zamA_ |
| PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b; |
PDBTitle: crystal structure of mouse skd1/vps4b apo-form
|
| Resolution | 3.50 Å |
|
| | |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . |
| Predicted Secondary structure | |
 | | |  |
|
|
|
|
|
|  | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
M | I | V | S | G | R | S | G | S | G | K | S | V | A | L | R | A | L |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
| |
|
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
|
|
|
|
|
|
|
| |
|
| |
|
|
| Template Sequence | |
I | L | L | F | G | P | P | G | T | G | K | S | Y | L | A | K | A | V |
| Template Known Secondary structure | |
| | | |
| S | T | T | S |
| | | | | | | | |
| Template Predicted Secondary structure | |
| | | |
|
|
|
|
|
| | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
