Job Description P0A894 Confidence 98.64% Date Thu Jan 5 11:07:13 GMT 2012 Rank 32 Aligned Residues 149 % Identity 16% Template c2xb4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenylate kinase; PDBTitle: crystal structures of zinc containing adenylate kinase from2 desulfovibrio gigas Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.																												.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	L	M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	L	.	E	D	M	G	F	Y	C	V	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	V	V	L	L	P	D	L	A	R	T	L	A	D	R	E	I	S	A	A
Query Conservation																							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.															.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		M	N	I	L	I	F	.	G	P	N	G	S	G	K	G	T	Q	G	N	L	V	K	D	K	Y	S	L	A	H	I	E	S	G	G	I	F	R	E	H	I	G	G	G	T	E	L	G	K	K	A	K	E	F	I	D	R	G	D	L	V	P	D	D	I	T	I	P	M	V	L	E	T	L	E	S	K	G	K	D	G
Template Known Secondary structure								.			T	T	S														T														T	T	T	T												T	T	T																					T	T
Template Predicted Secondary structure								.
Template SS confidence
		1	.	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																														.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	I	D	V	R	N	M	P	E	S	P	E	I	F	E	Q	A	M	S	N	L	P	D	A	F	S	P	.	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R	Y	S	D	T	R	R	L	H	P	L	S	S	K	N	L	S	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																							.																			.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																																										.
Template Sequence		W	L	L	D	G	.	F	P	R	N	T	V	Q	A	Q	K	L	F	E	A	L	Q	E	K	G	M	K	I	N	F	V	I	E	I	L	L	P	R	E	V	A	K	N	R	I	M	G	.	R	R	I	C	K	N	N	P	N	H	P	N	N	I	F	I	D	A	I	K	P	N	G	D	V	C	R	V	C	G	G	A
Template Known Secondary structure						S	.				S														T	T																						T	.	B				S	S		T	T	S			B	T	T		G	G	G			B	T	T	B		T	T	T			B
Template Predicted Secondary structure							.																																										.
Template SS confidence
		80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
												114	.	.	.	.	.	120	.	.	.																	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	S	A	I	D	K	E	S	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	L	R	S	R	A	D	L	I	.	V	D	T	S	E	M	S	V	H	E	L	A	E	M	L	R	T	R	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence		.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.						.
Template Conservation																																																						.
Template Sequence		L	S	A	R	A	D	D	Q	D	E	G	A	I	N	K	R	H	D	I	Y	Y	N	T	V	D	G	T	L	A	A	A	Y	Y	Y	K	N	M	A	A	K	E	G	F	V	Y	I	E	L	D	G	E	G	.	S	I	D	S	I	K	D	T	L	L	A	Q	L	A
Template Known Secondary structure						G	G	G	G													T		T	T	T	S										T	T					T								T	T	S	.
Template Predicted Secondary structure																																																						.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions