Job Description P0A894 Confidence 98.83% Date Thu Jan 5 11:07:13 GMT 2012 Rank 17 Aligned Residues 128 % Identity 20% Template c2pt5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:shikimate kinase; PDBTitle: crystal structure of shikimate kinase (aq_2177) from aquifex aeolicus2 vf5 Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30											.	.	.	.	.	.	.	.	.	40	.	.											.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																				.										.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.										.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	L	.	E	D	M	G	F	Y	C	V	D	.	.	.	.	.	.	.	.	.	.	N	L	P	V	V	L	L	P	D	L	A	R	.	.	.	.	.	.	.	.	.	.	T	L	A	D	R	E	I	S	A	A	V	S	I	D	V	R	N	M	P	E
Query Conservation																				.										.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence																				.										.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	L	I	G	F	X	C	S	G	K	S	T	V	G	S	L	L	S	R	S	L	N	I	P	F	Y	D	V	D	E	E	V	Q	K	R	E	G	L	S	I	P	Q	I	F	E	K	K	G	E	A	Y	F	R	K	L	E	F	E	V	L	K	D	L	S	E	K	E	N	V	V	I	S	T	G	G	G	L	G	A
Template Known Secondary structure								G	G	G														T															T																											T	T	S	S	S											T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	E	I	F	E	Q	A	M	S	N	L	P	D	A	F	S	P	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R	Y	S	D	T	R	R	L	H	P	L	S	S	K	N	L	S	L	E	S	A	I	D	K	E	S	D	L	L	E	P	L	R	S	R	A	D	L	I	V	D	T	S	E	M	S	V	H
Query Conservation
Alig confidence														.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation														.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		N	E	E	A	L	N	F	X	K	S	R	G	.	.	.	.	.	.	T	T	V	F	I	D	I	P	F	E	V	F	L	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	R	P	L	D	E	I	K	N	L	F	E	E	R	R	K	I	Y	S	K	A	D	I	K	V	K	G	E	K	.	P	P	E
Template Known Secondary structure													S	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T	S	S						S	S	.
Template Predicted Secondary structure														.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.															110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.
		143	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	E	M	L	R	T	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	V	K	E	I	L	L	S	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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