Job Description P0A894 Confidence 98.63% Date Thu Jan 5 11:07:13 GMT 2012 Rank 34 Aligned Residues 147 % Identity 15% Template c2h92C_ PDB info PDB header:transferase Chain: C: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of staphylococcus aureus cytidine2 monophosphate kinase in complex with cytidine-5'-3 monophosphate Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30												.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																					.										.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.										.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	L	.	E	D	M	G	F	Y	C	V	D	.	.	.	.	.	.	.	.	.	.	.	N	L	P	V	V	L	L	P	D	L	A	R	T	L	A	D	R	E	I	S	A	A	V	S	I	D	V	R	N	M	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.										.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Alig confidence																					.										.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	A	L	D	G	P	A	A	A	G	K	S	T	I	A	K	R	V	A	S	E	L	S	M	I	Y	V	D	T	G	A	M	Y	R	A	L	T	Y	K	Y	L	K	L	N	K	T	E	D	F	A	K	L	V	D	Q	T	T	L	D	L	T	Y	K	A	D	K	G	Q	C	V	I	L	D	N	E	D	V	T	D
Template Known Secondary structure									T	T	S	S												T	T																				T	T	S		S								T									T	T								T	T				G	G
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
																				61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	S	P	E	I	F	E	Q	A	M	S	N	L	P	D	A	F	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R	Y	S	D	T	R	R	L	H	P	L	S	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																																																																.	.
Template Sequence		F	L	R	N	N	D	V	T	Q	H	V	S	Y	V	A	S	K	E	P	V	R	S	F	A	V	K	K	Q	K	E	L	A	A	E	K	G	I	V	M	D	G	R	D	I	G	T	V	V	L	P	D	A	D	L	K	V	Y	M	I	A	S	V	E	E	R	A	E	R	R	Y	K	D	N	Q	L	R	G	I	.	.
Template Known Secondary structure		G	S	S	S	S											T	S																T	T								S	S							T	T		S																							T	T		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.
Query Sequence		K	N	L	S	L	E	S	A	I	D	K	E	S	D	L	L	E	P	L	R	S	R	A	.	.	.	.	.	.	.	.	.	D	L	I	V	D	T	S	E	M	S	V	H	E	L	A	E	M	L	R	T	R	L
Query Conservation																									.	.	.	.	.	.	.	.	.
Alig confidence		.																							.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	E	S	N	F	E	D	L	K	R	D	I	E	A	R	D	Q	Y	D	M	N	R	E	I	S	P	L	R	K	A	D	D	A	V	T	L	D	T	T	G	K	S	I	E	E	V	T	D	E	I	L	A	M	V
Template Known Secondary structure		.																						S	S	S		S				T	T							T	T
Template Predicted Secondary structure		.
Template SS confidence
			163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions