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Job DescriptionP0A894
Confidence98.20%DateThu Jan 5 11:07:13 GMT 2012
Rank55Aligned Residues144
% Identity11%Templatec2ccjA_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of s. aureus thymidylate kinase complexed2 with thymidine monophosphate
Resolution1.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30 .........40..... .
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Query Sequence  VLMIVSGRSGSGKSVALRALEDM. . . GFYCVD. . . . . . . . . . . . . . . . . . . . . NLPVVLLPDLARTLA. . . . . . . . . . . D
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Template Sequence  AFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPAL
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TTS
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SSTT
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T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   47..50..... ....60.........70...... ...80.........90.........100.........110......
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Query Sequence  REISAAVSI. . . . . . . . . DVRNMPESPEIFEQAMSNLPD. AFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAI
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Template Sequence  KEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSNRLDQ. . . . . EDLKFH
Template Known Secondary structure  TT
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TTTTTSS
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   83......90.........100.........110.........120.........130.........140.........150. ......
 
   117..120.........130.........140.........150..
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Query Sequence  DKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRL
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Template Sequence  EKVIEGYQEIIHR. FKSVNAD. QPLENVVEDTYQTI
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   161........170... ......180 .........190....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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