Job Description P0A894 Confidence 97.98% Date Thu Jan 5 11:07:13 GMT 2012 Rank 76 Aligned Residues 147 % Identity 14% Template c2ak3B_ PDB info PDB header:transferase (phosphotransferase) Chain: B: PDB Molecule:adenylate kinase isoenzyme-3; PDBTitle: the three-dimensional structure of the complex between2 mitochondrial matrix adenylate kinase and its substrate3 amp at 1.85 angstroms resolution Resolution 1.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30																												.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	L	M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	L	.	E	D	M	G	F	Y	C	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	P	V	V	L	L	P	D	L	A	R	T	L	A	D	R	E	I	S	A	A
Query Conservation																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	R	A	A	I	M	G	A	P	G	S	G	K	G	T	V	S	S	R	I	T	K	H	F	E	L	K	H	L	S	S	G	D	L	L	R	D	N	M	L	R	G	T	E	I	G	V	L	A	K	T	F	I	D	Q	G	K	L	I	P	D	D	V	M	T	R	L	V	L	H	E	L	K	N	L	T	Q	Y	N
Template Known Secondary structure											T	T	S	S												B																		T												T	T	T																	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																									.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	I	D	V	R	N	M	P	E	S	P	E	I	F	E	Q	A	M	S	N	L	P	D	A	F	S	P	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	R	R	L	H	P	L	S	S	K
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		W	L	L	D	G	F	P	R	T	.	.	.	.	.	L	P	Q	A	E	A	L	D	R	A	Y	Q	I	D	T	V	I	N	L	N	V	P	F	E	V	I	K	Q	R	L	T	A	R	W	I	H	P	G	S	G	R	V	Y	N	I	E	F	N	P	P	K	T	M	G	I	D	D	L	T	G	E	P	L	V	Q	R
Template Known Secondary structure						S				S	.	.	.	.	.									T	T	S																				T						T	T	T	T					T	T	T	B			S	S	T	T	B		T	T	T			B		B
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		N	L	S	L	E	S	A	I	.	.	.	.	.	.	.	D	K	E	S	D	L	L	E	P	L	R	S	R	A	D	L	I	V	D	T	S	E	M	S	V	H	E	L	A	E	M	L	R	T	R	L
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	D	R	P	E	T	V	V	K	R	L	K	A	Y	E	A	Q	T	E	P	V	L	E	Y	Y	R	K	K	G	V	L	E	T	F	S	G	T	E	T	N	K	I	W	P	H	V	Y	A	F	L
Template Known Secondary structure		G	G	G	S																									T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions