Job Description P0A894 Confidence 98.03% Date Thu Jan 5 11:07:13 GMT 2012 Rank 73 Aligned Residues 145 % Identity 14% Template c1znyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:guanylate kinase; PDBTitle: crystal structure of mycobacterium tuberculosis guanylate kinase in2 complex with gdp Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.																	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Query SS confidence																						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Query Sequence		V	L	M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	L	.	E	D	M	G	F	Y	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	L	P	V	V	L	L	P	D	L	A	R	T	L	A	D	R	E	I	S	A	A	V	S	I	.	.	.	.	.	.	.	.	.
Query Conservation																						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Alig confidence																						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	V	V	L	S	G	P	S	A	V	G	K	S	T	V	V	R	C	L	R	E	R	I	P	N	L	H	F	S	V	S	A	T	T	R	A	P	R	P	G	E	V	D	G	V	D	Y	H	F	I	D	P	T	R	F	Q	Q	L	I	D	Q	G	E	L	L	E	W	A	E	I	H	G	G	L	H	R	S	G	T
Template Known Secondary structure									S	T	T	S													S	T	T									S	S				T	T			B	T	T	T	B														T	T									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
												56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	D	V	R	N	M	P	E	S	P	E	I	F	E	Q	A	M	S	N	L	P	D	A	F	S	P	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R	Y	S	D	T	R	R	L	H	P	L	S	S	K	N	L	S	L	E	S	A	I	D	K	E	S	D	L	L	E	P
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.											.
Template Conservation																																																													.	.	.	.	.											.
Template Sequence		L	A	Q	P	V	R	A	A	A	A	T	G	V	P	V	L	I	E	V	D	L	A	G	A	R	A	I	K	K	T	M	P	E	A	V	T	V	F	L	A	P	P	S	W	Q	D	L	Q	A	R	L	I	G	R	G	T	E	T	A	.	.	.	.	.	D	V	I	Q	R	R	L	D	T	A	.	R	I	E	L	A
Template Known Secondary structure												T	T																				T	T	S								S											T	T	S		S			.	.	.	.	.											.					T
Template Predicted Secondary structure																																																													.	.	.	.	.											.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170		.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	S	R	A	D	L	I	V	D	T	S	E	M	S	V	H	E	L	A	E	M	L	R	T	R	L	L	G
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		A	Q	G	D	F	D	K	V	V	V	N	R	.	.	R	L	E	S	A	C	A	E	L	V	S	L	L	V	G
Template Known Secondary structure		T	G	G	G	S	S						S	.	.	S
Template Predicted Secondary structure														.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions