Job Description P0A894 Confidence 97.50% Date Thu Jan 5 11:07:13 GMT 2012 Rank 105 Aligned Residues 90 % Identity 17% Template c1yj5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																					.												.	.	.	.
Query SS confidence																					.												.	.	.	.
Query Sequence		V	L	M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	.	L	E	D	M	G	F	Y	C	V	D	N	.	.	.	.	L	P	V	V	L	L	P	D	L	A	R	T	L	A	D	R	E	I	S	A	A	V	S	I	D	V	R	N	M	P	E	S	P	E	I	F	E	Q	A	M	S	N	L	P	D
Query Conservation																					.												.	.	.	.
Alig confidence																					.												.	.	.	.																			.	.	.										.
Template Conservation																																																							.	.	.										.
Template Sequence		E	V	V	V	A	V	G	F	P	G	A	G	K	S	T	F	I	Q	E	H	L	V	S	A	G	Y	V	H	V	N	R	D	T	L	G	S	W	Q	R	C	V	S	S	C	Q	A	A	L	R	Q	G	K	R	.	.	.	V	V	I	D	N	T	N	P	D	.	V	P	S	R	A	R	Y	I	Q	C	A	K	D	A
Template Known Secondary structure										T	T	S	S									T	G	G	G	T											S														T	T			.	.	.					S				S	.
Template Predicted Secondary structure																																																							.	.	.										.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.				.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	S	P	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	P	C	R	C	F	N	F	C	A	T	I	E	Q	A	R	H	N
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions