Job Description P0A894 Confidence 90.01% Date Thu Jan 5 11:07:13 GMT 2012 Rank 273 Aligned Residues 92 % Identity 17% Template c1in8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:holliday junction dna helicase ruvb; PDBTitle: thermotoga maritima ruvb t158v Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																																						.	.	.
Query SS confidence																				.	.	.																																						.	.	.
Query Sequence		M	I	V	S	G	R	S	G	S	G	K	S	V	A	L	R	A	L	.	.	.	E	D	M	G	F	Y	C	V	D	N	L	P	V	V	L	L	P	D	L	A	R	T	L	A	D	R	E	I	S	A	A	V	S	I	D	V	R	.	.	.	N	M	P	E	S	P	E	I	F	E	Q	A	M	S	N	L	P	D	A
Query Conservation																				.	.	.																																						.	.	.
Alig confidence																				.	.	.																																						.	.	.
Template Conservation
Template Sequence		V	L	L	A	G	P	P	G	L	G	K	T	T	L	A	H	I	I	A	S	E	L	Q	T	N	I	H	V	T	S	G	P	V	L	V	K	Q	G	D	M	A	A	I	L	T	S	L	E	R	G	D	V	L	F	I	D	E	I	H	R	L	N	K	A	V	E	E	L	L	Y	S	A	I	E	D	F	Q	I	D	I
Template Known Secondary structure						S	S	T	T	S	S													T								T	T	T			S										T			T	T							T	G	G	G																S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	P	Q	L	L	F	L	D	A	D	R	N	T	L	I	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	P	F	T	L	V	G	A	T	V	R	S	G	L	L	S	S	P
Template Known Secondary structure											S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions