Job Description P10384 Confidence 98.98% Date Thu Jan 5 11:32:12 GMT 2012 Rank 13 Aligned Residues 266 % Identity 11% Template c3fhhA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane heme receptor shua; PDBTitle: crystal structure of the heme/hemoglobin outer membrane2 transporter shua from shigella dysenteriae Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	E	F	N	D	T	Y	A	G	G	S	V	G	G	T	T	D	L	E	T	M	N	L	N	L	S	G	A	Y	R	L	N	N	A	W	S	F	G	L	G	F	N	A	V	Y	A	R	A	K	I	E	R	F	A	G	D	L	G	Q	L	V	A	G	Q	I	M	Q	S	P	A	G	Q	T	Q	Q	G	Q	A
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		G	G	T	R	Y	D	S	Y	R	G	S	S	D	G	Y	K	D	V	D	A	D	K	W	S	S	R	A	G	M	T	I	N	P	T	N	W	L	M	L	F	G	S	Y	A	Q	A	F	R	A	P	T	M	G	E	M	Y	N	D	S	K	H	F	S	I	G	R	F	Y	T	N	Y	W	V	P	N	.	.	.	.	.
Template Known Secondary structure														S	S	S																		S	S	S	S																							S					S	S	S	S									.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	T	A	N	G	I	D	S	N	T	K	I	A	H	L	N	G	N	Q	W	G	F	G	W	N	A	G	I	L	Y	E	L	D	K	N	N	R	Y	A	L	T	Y	R	S	E	V	K	I	D	F	K	G	N	Y	S	S	D	L	N	R	A	F	N	N	Y	G	L	P	I	P	T	A	T	G	G	A	T	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	P	N	L	R	P	E	T	N	E	T	Q	E	Y	G	F	G	L	R	F	D	D	L	M	L	S	N	D	A	L	E	F	K	A	S	Y	F	D	T	K	A	K	D	Y	I	S	T	T	V	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	A	T	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T	T																			S		T	T																										G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.																	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		S	G	Y	L	T	L	N	L	P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	.	N	W	T	F	R
Query Conservation																																																																												.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	Y	N	V	P	N	A	K	I	W	G	W	D	V	M	T	K	Y	T	T	D	L	F	S	L	D	V	A	Y	N	R	T	R	G	K	D	T	D	T	.	.	.	.	.	.	.	.	.	.	.	.	G	E	Y	I	S	S	I	N	P	D	T	V	T	S	T	L	N	I	P	I	A	H	S	G	F	S	V	G
Template Known Secondary structure																							S	S															T	T	T	.	.	.	.	.	.	.	.	.	.	.	.			B		S	S															T	T	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.													.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.				.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		T	G	I	A	F	D	D	S	P	V	P	A	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N	.	.	.	K	D	A	S	V	D	V	G	V	S	Y	M	H	G	Q	S	V	K	I	N	E	G	P	Y	Q	F	E	S	E	G	K	A	W	L	F	G	T	N	F	N	Y
Query Conservation																																						.	.	.
Alig confidence																			.	.	.	.	.															.	.	.																							.	.	.	.	.
Template Conservation																			.	.	.	.	.																																								.	.	.	.	.
Template Sequence		W	V	G	T	F	A	D	R	S	T	H	I	S	S	K	Q	P	.	.	.	.	.	G	Y	G	V	N	D	F	Y	V	S	Y	Q	G	Q	Q	A	L	K	G	M	T	T	T	L	V	L	G	N	A	F	D	K	E	Y	W	S	P	Q	G	.	.	.	.	.	I	P	Q	D	G	R	N	G	K	I	F	V	S	Y
Template Known Secondary structure																			.	.	.	.	.															G	G	G	T	T									S	T	T					B		T	T	S	.	.	.	.	.		B				S
Template Predicted Secondary structure																			.	.	.	.	.																																								.	.	.	.	.
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.						.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.						.	.	.	.	.	.	.	.	630	.	.	.	.	.
		445	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		639	640

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions