Job Description P10384 Confidence 4.38% Date Thu Jan 5 11:32:12 GMT 2012 Rank 63 Aligned Residues 141 % Identity 15% Template c3dzmB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of a major outer membrane protein from thermus2 thermophilus hb27 Resolution 2.80 Å

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		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		L	P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	N	.	W	T	F	R	T	G	I	A	F	D	D
Query Conservation																																																																						.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	L	G	V	R	L	G	V	G	F	A	T	S	D	A	L	D	.	.	.	.	.	.	.	.	.	.	D	G	Y	D	L	G	G	G	T	T	W	G	D	V	K	E	A	G	K	F	S	E	W	G	Q	N	V	T	L	S	L	D	V	L	Y	K	P	L	P	V	E	V	A	P	Y	F	G	V	R	Y	N	F
Template Known Secondary structure																		B		.	.	.	.	.	.	.	.	.	.	T	T		B		S	S	S		B									T																					S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.											.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		375	.	.					.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.							.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure					.	.	.	.																										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.																										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	V	.	.	.	.	P	A	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	.	.	.	.	.	.	N	K	D	A	S	V	D	V	G	V	S	Y	M	H	G	Q	S	V	K	I	N	E	G	P	Y	Q	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.	.	.	.																										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.																										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	G	G	Y	T	D	P	E	D	N	L	T	I	K	A	Q	T	I	S	S	N	Q	L	G	L	G	L	G	V	R	A	A	Y	P	L	M	P	N	L	S	L	V	G	D	L	G	V	D	Y	Y	F	Q	A	C	F	T	R	V	E	E	D	D	S	G	N	K	S	Q	S	S	V	C	P	G	D	S	G	Y	E
Template Known Secondary structure										S	S	S	S	S	S																								T	T																								T	T										T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
									431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	E	G	K	A	W	L	F	G	T	N	F	N	Y	A	F
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	N	K	F	V	T	Q	P	E	W	V	L	K	L	R	L	G	A	A	Y	R	F
Template Known Secondary structure							B				S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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