Return to main results Retrieve Phyre Job Id

Job DescriptionP10384
Confidence83.86%DateThu Jan 5 11:32:12 GMT 2012
Rank50Aligned Residues205
% Identity11%Templatec3aehB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110...... ...120.........130.........140.........150.........160.........170.........180..
Predicted Secondary structure 



...


















Query SS confidence 










. . .

































































Query Sequence  NMHFVAPINDQ. . . FGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRLNNAWSFGLGFNAVYARAKIER
Query Conservation             ...   
       
                             
    
  
 
 
            
Alig confidence 










...














.........









































Template Conservation    
 
            
           .........         
   


                          
Template Sequence  QMGADRKHELGSMDLFTGVMATYTDTDAS. . . . . . . . . ADLYSGKTKSWGGGFYASGLFRSGAYFDVIAKYIHNENKYDL
Template Known Secondary structure  TT.........TTTTS
Template Predicted Secondary structure 




.........







Template SS confidence 















































































   1141........1150.........1160......... 1170.........1180.........1190.........1200.........1210.
 
   183......190.........200.........210.........220.........230.........240.........250.........260..
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  FAGDLGQLVAGQIMQSPAGQTQQGQALAATANGIDSNTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKG
Query Conservation                                                        
           
  
          
Alig confidence 

.................................









































...
Template Conservation    .................................                 
 

   
     
 
   
 
   ...
Template Sequence  NF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQAELVWGRL. . .
Template Known Secondary structure  SS.................................TT

TT...
Template Predicted Secondary structure 
.................................










...
Template SS confidence 















































































   1212. ......1220.........1230.........1240.........1250.....
 
   263......270.........280.........290.........300.........310.........320.........330.........340..
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  NYSSDLNRAFNNYGLPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATSTSGDTLFQK
Query Conservation                                    
     
          
         
                  
Alig confidence  .......................





















.













...............




Template Conservation  .......................       
     
        .              ............... 
   
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . QGQNSVNPLVGRTGVVSGKTFS. GKDWSLTARAGLHY. . . . . . . . . . . . . . . EFDLT
Template Known Secondary structure  .......................



.
SS...............S
Template Predicted Secondary structure  .......................






.


...............


Template SS confidence 















































































   1256...1260.........1270....... ..1280.........1290. .....
 
   343......350.........360.........370.........380.........390.........400....
Predicted Secondary structure 





























Query SS confidence 





























































Query Sequence  HEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFNK
Query Conservation              
 

     
 




 
              
        

  
    
Alig confidence 




































..........














Template Conservation             

          
        
    ..........       



 
  
Template Sequence  DSRKDSRMLYGVGLNARFGDNTRLGLEVERSAFGKYN. . . . . . . . . . TDDAINANIRYSFLE
Template Known Secondary structure 


TTTS
SS..........

Template Predicted Secondary structure 













..........

Template SS confidence 





























































   1312.......1320.........1330.........1340........ .1350.........1360...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions