Job Description P10384 Confidence 96.82% Date Thu Jan 5 11:32:12 GMT 2012 Rank 40 Aligned Residues 232 % Identity 11% Template c2qomB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. Resolution 2.66 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	H	F	V	A	P	I	N	D	Q	F	G	W	G	A	S	I	T	S	N	Y	G	L	A	T	E	F	N	D	T	Y	A	G	G	S	V	G	G	T	T	D	L	E	T	M	N	L	N	L	S	G	A	Y	R	L	N	N	A	W	S	F	G	L	G	F	N	A	V	Y	A	R	A	K	I	E	R	F	A	G
Query Conservation
Alig confidence																									.	.	.	.	.	.	.																																															.	.	.	.
Template Conservation																									.	.	.	.	.	.	.																																															.	.	.	.
Template Sequence		Q	V	G	V	D	K	K	H	E	L	G	L	D	L	F	T	G	F	T	V	T	H	T	.	.	.	.	.	.	.	D	S	S	A	S	A	D	V	F	S	G	K	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	S	G	A	Y	I	D	L	I	G	K	Y	V	H	H	D	N	E	Y	T	.	.	.	.
Template Known Secondary structure																									.	.	.	.	.	.	.							S	S																			T	T	S																		.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.																																															.	.	.	.
Template SS confidence
		1064	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.								.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	G	Q	L	V	A	G	Q	I	M	Q	S	P	A	G	Q	T	Q	Q	G	Q	A	L	A	A	T	A	N	G	I	D	S	N	T	K	I	A	H	L	N	G	N	Q	W	G	F	G	W	N	A	G	I	L	Y	E	L	D	K	N	N	R	Y	A	L	T	Y	R	S	E	V	K	I	D	F	K	G	N	Y	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	F	A	T	R	D	Y	S	T	H	S	W	Y	A	G	A	E	A	G	Y	R	Y	H	V	T	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G	S	V	S	G	K	Q	F	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																		1134	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	N	R	A	F	N	N	Y	G	L	P	I	P	T	A	T	G	G	A	T	Q	S	G	Y	L	T	L	N	L	P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Sequence		W	K	D	G	M	H	L	S	.	.	.	.	.	.	.	.	.	.	.	.	M	K	D	K	D	Y	N	P	L	I	G	R	T	G	V	D	V	G	K	S	F	S	G	K	W	K	V	T	A	R	A	G	L	G	Y	Q	F	.	D	L	L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E
Template Known Secondary structure		B					S	B		.	.	.	.	.	.	.	.	.	.	.	.																																						.					T		T	T	B				T	T	S	S			S	S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template SS confidence
		1185	.	.	.	.	1190	.	.													.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.		1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	N	W	T	F	R	T	G	I	A	F	D	D	S	P	V	P	A	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	S	R	M	L	M	S	V	G	L	N	A	E	I	R	D	N	V	R	F	G	L	E	F	E	K	S	A	F	G	K	Y	N	.	.	.	.	.	.	.	.	.	.	V	D	N	A	V	N	A	N	F	R	Y	S	F	G
Template Known Secondary structure																	T	T	T					.							S	S	S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1254	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.											.	.	1290	.	.	.	.	.	.	.	.	.	1300	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions