Job Description P21151 Confidence 99.77% Date Thu Jan 5 11:37:50 GMT 2012 Rank 77 Aligned Residues 259 % Identity 17% Template c3e1hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a type iii polyketide synthase2 pksiiinc from neurospora crassa Resolution 2.58 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		R	A	E	D	L	S	A	H	L	M	R	S	L	L	A	R	N	P	A	L	E	A	A	A	L	D	D	I	Y	W	G	C	V	Q	Q	T	L	E	Q	G	F	N	I	A	R	N	A	A	L	L	A	E	V	P	H	S	V	P	A	V	T	V	N	R	.	L	C	G	S	S	M	Q	A	L	H	D	A	A	R	M
Query Conservation																																																																		.
Alig confidence																	.																			.	.																													.
Template Conservation																	.																			.	.
Template Sequence		D	G	V	P	L	A	V	E	A	S	R	K	A	M	A	.	E	A	R	L	V	P	A	Q	I	T	H	M	V	S	T	T	C	T	.	.	D	S	A	N	P	G	Y	D	H	Y	V	A	K	E	L	G	L	S	D	R	L	E	K	V	L	L	H	G	I	G	C	S	G	G	L	A	A	L	R	T	A	A	N	L
Template Known Secondary structure			T														.			T			G	G	G									S	S	.	.				S	S											T			T	T								S		G	G	G
Template Predicted Secondary structure																	.																			.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		105	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		I	M	T	.	.	.	.	G	D	A	Q	A	C	L	V	G	G	V	E	H	M	G	H	V	P	M	S	H	G	V	D	F	H	P	G	L	S	R	N	V	A	K	A	A	G	M	M	G	L	T	A	E	M	L	A	R	M	H	G	I	S	R	E	M	Q	D	A	F	A	A	R	S	H	A	R	A	W	A	A	T
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	L	G	H	T	A	R	G	K	P	A	R	I	L	V	L	A	L	E	V	S	T	T	M	V	R	S	E	L	E	S	I	D	A	L	Q	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T														G	G	G												T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	A	A	F	K	N	E	I	I	P	T	G	G	H	D	A	D	G	V	L	K	Q	F	N	Y	D	E	V	I	R	P	E	T	T	V	E	A	L	A	T	L	R	P	A	F	D	P	V	N	G	M	V	T	A	G	T	S	S	A	L	S	D	G	A	A	A	M	L	V	M	S	E	S	R	A	H	E	L	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	G	I	A	L	F	S	D	C	A	S	A	V	I	L	S	N	G	I	G	E	A	P	G	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							B													T	T			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																								204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.																														.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	P	R	A	R	V	R	S	M	A	V	V	G	C	D	P	S	I	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	P	V	P	A	S	K	L	A	L	K	K	A	G	L	S	A	S	D	I	G	V	F	E	M	N	E	A	F
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																																												.
Template Sequence		P	A	I	Y	D	L	L	G	W	E	N	R	V	I	P	D	S	E	H	D	L	G	F	D	V	D	P	M	G	W	K	V	V	L	S	P	R	V	P	V	L	A	K	A	S	L	Q	P	T	Y	A	D	L	L	S	S	L	Q	D	Q	L	P	S	S	Y	Q	K	P	A	D	F	D	W	A	.	M	H	P	G	G
Template Known Secondary structure				S												T	T		T	T	T							T	T								T	T																					G	G	G	S		T	T	S		S	G	G	G	S				.				S	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.							.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		A	A	Q	I	L	P	C	I	K	D	L	G	L	I	E	Q	I	D	E	K	I	N	L	N	G	G	A	I	A	L	G	H	P	L	G	C	S	G	A	R	I	S	T	T	L	L	N	L	M	E	R	.	.	.	.	.	.	K	D	V	Q	F	G	L	A	T	M	C	I	G	L	G	Q	G	I	A	T	V	F	E
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																	.	.																																			.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		A	T	I	L	S	G	A	E	S	A	M	G	L	T	P	.	.	E	H	M	R	A	S	Y	D	R	Y	I	N	H	G	N	S	S	S	A	T	I	F	S	V	L	N	R	L	R	E	K	D	M	D	A	L	A	P	G	G	K	V	K	E	Y	V	V	G	C	A	F	G	P	G	I	N	V	E	M	C	M	L	K
Template Known Secondary structure													T			G	.	.	G	G	G												B		G	G	G										T	S	T	T	T	T	S		S	S	S	S				S									T	T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		386
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		387

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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