Job Description P21151 Confidence 100.00% Date Thu Jan 5 11:37:50 GMT 2012 Rank 6 Aligned Residues 381 % Identity 42% Template c2wuaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetoacetyl coa thiolase; PDBTitle: structure of the peroxisomal 3-ketoacyl-coa thiolase from2 sunflower Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	V	I	V	D	A	I	R	T	P	M	G	R	S	K	G	G	A	F	R	N	V	R	A	E	D	L	S	A	H	L	M	R	S	L	L	A	R	N	P	A	L	E	A	A	A	L	D	D	I	Y	W	G	C	V	Q	Q	T	L	E	Q	G	F	N	I	A	R	N	A	A	L	L	A	E	V	P	H	S
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		D	D	V	V	I	V	A	A	Y	R	S	P	L	C	K	A	K	R	G	G	L	K	D	T	Y	P	D	D	I	L	A	P	V	L	K	A	L	I	E	.	K	T	N	I	N	P	A	E	V	G	D	I	V	V	G	S	V	L	G	A	G	S	Q	R	A	S	E	C	R	M	A	A	F	Y	A	G	F	P	E	T
Template Known Secondary structure																	T	T	T	S	T	T	T	T	S																.						G	G	G										S	S																T	T			T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		V	P	A	V	T	V	N	R	L	C	G	S	S	M	Q	A	L	H	D	A	A	R	M	I	M	T	G	D	A	Q	A	C	L	V	G	G	V	E	H	M	G	H	V	P	M	S	H	G	V	D	F	H	P	G	L	S	R	N	V	A	.	.	K	A	A	G	M	M	G	L	T	A	E	M	L	A	R	M	H	G
Query Conservation																																																														.	.
Alig confidence																																																														.	.
Template Conservation
Template Sequence		V	P	V	R	T	V	N	R	Q	C	S	S	G	L	Q	A	V	A	D	V	A	A	A	I	K	A	G	F	Y	D	I	G	I	G	A	G	L	E	S	M	T	A	N	P	M	A	W	E	G	S	V	N	P	K	V	K	T	M	A	Q	A	Q	D	C	L	L	P	M	G	I	T	S	E	N	V	A	Q	K	F	S
Template Known Secondary structure		S								G	G	G															T	T	S		S										T	T	T							S				G	G	G	G	G							T	T	S														T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		I	S	R	E	M	Q	D	A	F	A	A	R	S	H	A	R	A	W	A	A	T	Q	S	A	A	F	K	N	E	I	I	P	.	.	.	.	.	T	G	G	H	D	A	D	G	V	L	K	Q	F	N	Y	D	E	V	I	R	P	E	T	T	V	E	A	L	A	T	L	R	P	A	F	D	P	V	N	G	M	V	T
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.																																								.
Template Conservation																																																																														.
Template Sequence		I	T	R	Q	E	Q	D	Q	A	A	V	G	S	H	R	K	T	A	A	A	T	A	A	G	R	F	K	D	E	I	I	P	I	K	T	K	I	V	D	P	K	T	G	D	E	K	P	V	T	I	S	V	D	D	G	I	R	P	G	T	S	L	A	D	L	A	K	L	K	P	V	F	R	K	D	G	.	S	T	T
Template Known Secondary structure																									T	T	T	T	T	T	B										T	T	T										S		S				T	T								T				S	S		T	T		.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	T	S	S	A	L	S	D	G	A	A	A	M	L	V	M	S	E	S	R	A	H	E	L	G	L	K	P	R	A	R	V	R	S	M	A	V	V	G	C	D	P	S	I	M	G	Y	G	P	V	P	A	S	K	L	A	L	K	K	A	G	L	S	A	S	D	I	G	V	F	E	M	N	E	A	F	A	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	T	S	S	Q	V	S	D	G	A	G	A	V	L	L	M	K	R	S	I	A	L	Q	K	G	L	P	I	L	G	V	F	R	T	F	A	A	V	G	V	P	P	S	I	M	G	I	G	P	A	V	A	I	P	A	A	V	K	A	A	G	L	Q	I	D	D	I	D	L	F	E	I	N	E	A	F	A	S	Q
Template Known Secondary structure		G	G	G	B																						T																	G	G	G	G	G	G													T	T			G	G	G									S	B
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		I	L	P	C	I	K	D	L	G	L	I	E	Q	I	D	E	K	I	N	L	N	G	G	A	I	A	L	G	H	P	L	G	C	S	G	A	R	I	S	T	T	L	L	N	L	M	E	R	K	.	.	D	V	Q	F	G	L	A	T	M	C	I	G	L	G	Q	G	I	A	T	V	F	E	R	V
Query Conservation																																																			.	.
Alig confidence															.	.	.																																		.	.
Template Conservation															.	.	.
Template Sequence		F	V	Y	C	Q	K	K	L	E	I	D	P	Q	.	.	.	K	I	N	V	N	G	G	A	M	A	I	G	H	P	L	G	A	T	G	A	R	C	V	A	T	L	L	H	E	M	K	R	R	G	R	D	C	R	F	G	V	V	S	M	C	I	G	T	G	M	G	A	A	A	V	F	E	R	G
Template Known Secondary structure										T			G	G	.	.	.	G	B		T	T																														T	T											T	T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.				.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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