Job Description P21151 Confidence 100.00% Date Thu Jan 5 11:37:50 GMT 2012 Rank 29 Aligned Residues 283 % Identity 20% Template c2qo3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:eryaii erythromycin polyketide synthase modules 3 and 4; PDBTitle: crystal structure of [ks3][at3] didomain from module 3 of 6-2 deoxyerthronolide b synthase Resolution 2.59 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.															.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	R	S	K	G	G	A	F	R	N	V	R	A	E	D	L	S	A	H	L	M	R	S	L	L	A	R	N	P	A	L	E	A	A	A	L	D	.	.	.	.	D	I	Y	W	G	C	V	Q	Q	T	L	E	Q	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	A	R	N	A	A	L	L
Query Conservation																																								.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		F	G	V	S	P	R	E	A	A	A	M	D	P	Q	Q	R	L	L	L	E	T	S	W	E	L	V	E	.	N	A	G	I	D	P	H	S	L	R	G	T	A	T	G	V	F	L	G	V	A	K	F	G	Y	G	E	D	T	A	D	V	E	G	Y	S	V	T	G	V	A	P	A	V	A	S	G	R	I	S	Y	T
Template Known Secondary structure			T								T	S																	.		T	T			G	G	G	G	T	T	B													T	T	T	T				T	T						T	T
Template Predicted Secondary structure																													.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	P	H	S	V	P	A	V	T	V	N	R	L	C	G	S	S	M	Q	A	L	H	D	A	A	R	M	I	M	T	G	D	A	Q	A	C	L	V	G	G	V	E	H	M	G	H	V	P	M	S	H	G	V	D	F	H	P	G	L	S	R	N	V	A	K	A	A	G	M	M	G	L	T	A	E	M	L	A
Query Conservation
Alig confidence							.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	L	E	G	.	.	P	S	I	S	V	D	T	A	C	S	S	S	L	V	A	L	H	L	A	V	E	S	L	R	K	G	E	S	S	M	A	V	V	G	G	A	A	V	M	A	T	P	G	V	F	V	D	F	S	R	Q	R	A	L	A	A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	B		S	.	.								G	G	G															T	T	S		S	S										S	S	T								T	T	T		B		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	H	G	I	S	R	E	M	Q	D	A	F	A	A	R	S	H	A	R	A	W	A	A	T	Q	S	A	A	F	K	N	E	I	I	P	T	G	G	H	D	A	D	G	V	L	K	Q	F	N	Y	D	E	V	I	R	P	E	T	T	V	E	A	L	A	T	L	R	P	A	F	D	P	V	N	G	M	V	T	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	K	A	F	G	A	G	A	D	G	F	G	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	B	T	T				B		.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
																																																																			252	.	.	.	.	.	.	.	260	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		G	T	S	S	A	L	S	D	G	A	A	A	M	L	V	M	S	E	S	R	A	H	E	L	G	L	K	P	R	A	R	V	R	S	M	A	V	V	G	C	.	.	.	.	.	D	P	S	I	M	G	Y	G	P	V	P	A	S	K	L	A	L	K	K	A	G	L	S	A	S	D	I	G	V	F	E	M	N	E	A
Query Conservation																																										.	.	.	.	.
Alig confidence		.	.	.	.	.																																				.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	F	S	E	G	V	T	L	V	L	L	E	R	L	S	E	A	R	R	N	G	H	E	V	L	A	V	V	R	G	S	A	L	N	Q	D	G	A	S	N	G	L	S	A	P	S	G	P	A	Q	R	R	V	I	R	Q	A	L	E	S	C	G	L	E	P	G	D	V	D	A	V	E	A	H	G	T
Template Known Secondary structure		.	.	.	.	.	B	B																	T	T																	S		S	S	T	T																		T	T			G	G	G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		311	.						.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure				.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	.	.	.	.	.	A	Q	I	L	P	C	I	K	D	L	G	L	I	E	Q	I	D	E	K	I	N	L	N	G	G	A	I	A	L	G	H	P	L	G	C	S	G	A	R	I	S	T	T	L	L	N	L	M	E	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	A	L	G	D	P	I	E	A	N	A	L	L	D	T	Y	G	R	D	R	D	A	D	R	P	L	W	L	G	S	V	K	S	N	I	G	H	T	Q	A	A	A	G	V	T	G	L	L	K	V	V	L	A	L	R	N	G	E	L	P	A	T	L	H	V	E	E	P	T	P	H	V	D	W	S	S	G	G	V
Template Known Secondary structure				T	T	T												T	S	S	S			T	T	S							T						B		G	G	G																T						S	S		S	S	B		T	T	S			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
															364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	Q	F	G	L	A	T	M	C	I	G	L	G	Q	G	I	A	T	V	F	E	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	A	G	N	Q	P	W	R	R	G	E	R	T	R	R	A	A	V	S	A	F	G	I	S	G	T	N	A	H	V	I	V	E	E
Template Known Secondary structure					S	S						S	S	S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions