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Job DescriptionP21151
Confidence99.94%DateThu Jan 5 11:37:50 GMT 2012
Rank46Aligned Residues272
% Identity24%Templatec2qnxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3; PDBTitle: crystal structure of the complex between the mycobacterium beta-2 ketoacyl-acyl carrier protein synthase iii (fabh) and 11-3 [(decyloxycarbonyl)dithio]-undecanoic acid
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EQVVIVDAI. RTPMGRSKGGAFR. . . . . . . . . . . . . . . . . . . . . . . . NVRAEDLSAHLMRSLLARNPALEAAALDDIYWG
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Template Sequence  RSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEACRRALS. NAGLSAADIDGVIVT
Template Known Secondary structure  S


SSGGGTTTSS



S

TT

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GGG

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   57..60.........70.........80.........90.........100.........110.........120.........130......
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Query Sequence  CVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGL
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Template Sequence  TNTHF. LQTPPAAPMVAASLGAKG. ILGFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLS. . . . . . . . . . . . . .
Template Known Secondary structure  S


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SSS
TT
TT.


GGGTS
S
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   80.... .....90.........100.. .......110.........120.........130.........140...
 
   137..140.........150.........160.........170.........180.........190.........200.........210......
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Query Sequence  SRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTV
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Query Sequence  EALATLRPAFDPVNGMVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMG. . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . . . . PTIDMYDRGNCFIFADGAAAVVVGETPFQGIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLE
Template Known Secondary structure  ...........GG

TT
TTTTTTB

SS

B



GGGGGGSS
STTS




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   144.....150.........160.........170.........180.........190.........200.........210..
 
   282.......290.........300.........310.........320.........330.........340.........350..
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Query Sequence  . . . . . . . . . YGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARI
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Template Sequence  GPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRP. . . DAVVAN. DIEHTGNTSAASIPLA
Template Known Secondary structure  T

GGG


SS
T

T...T


.T
B
GGG
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   209210.........220.........230.........240.........250.........260.. ...... .270.........280....
 
   353......360.........370.........380.....
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Query Sequence  STTLLNLMERKDVQFGLATMCIGLGQGIATVFE
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Template Sequence  MAELLTTGAAKPGDLALLIGYGAGLSYAAQVVR
Template Known Secondary structure  TTSS
TT
GGG
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   284.....290.........300.........310......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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