Job Description P21151 Confidence 100.00% Date Thu Jan 5 11:37:50 GMT 2012 Rank 2 Aligned Residues 381 % Identity 48% Template c1ulqD_ PDB info PDB header:transferase Chain: D: PDB Molecule:putative acetyl-coa acetyltransferase; PDBTitle: crystal structure of tt0182 from thermus thermophilus hb8 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	V	I	V	D	A	I	R	T	P	M	G	R	S	K	G	G	A	F	R	N	V	R	A	E	D	L	S	A	H	L	M	R	S	L	L	A	R	N	P	A	L	E	A	A	A	L	D	D	I	Y	W	G	C	V	Q	Q	T	L	E	Q	G	F	N	I	A	R	N	A	A	L	L	A	E	V	P	H	S
Query Conservation
Alig confidence																		.																							.
Template Conservation																		.																							.
Template Sequence		P	E	A	W	I	V	E	A	V	R	T	P	I	G	K	H	.	G	G	A	L	A	S	V	R	P	D	D	L	L	A	H	A	L	S	V	L	V	D	.	R	S	G	V	P	K	E	E	V	E	D	V	Y	A	G	C	A	N	Q	A	G	E	D	N	R	N	V	A	R	M	A	L	L	L	A	G	F	P	V	E
Template Known Secondary structure																	T	.	T	S	T	T	T	T	S																.			T			G	G	G									S			S	S	T	T	T	T	T									T	T			T	T
Template Predicted Secondary structure																		.																							.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																			.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	A	V	T	V	N	R	L	C	G	S	S	M	Q	A	L	H	D	A	A	R	M	I	M	T	G	D	A	Q	A	C	L	V	G	G	V	E	H	M	G	H	V	P	M	S	H	G	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	P	G	L	S	R	N	V	A	K	A
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	G	C	T	V	N	R	L	C	G	S	G	L	E	A	V	A	Q	A	A	R	A	I	W	A	G	E	G	K	V	Y	I	G	S	G	V	E	S	M	S	R	A	P	Y	A	V	P	K	P	E	R	G	F	P	T	G	N	L	V	M	Y	D	T	T	L	G	W	R	F	V	N	P	K	M	Q	A	L	Y	G
Template Known Secondary structure										G	G	G															T	T	S		S										S	S	S										S	S	S			S							T	T	S	S			S									S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	M	M	G	L	T	A	E	M	L	A	R	M	H	G	I	S	R	E	M	Q	D	A	F	A	A	R	S	H	A	R	A	W	A	A	T	Q	S	A	A	F	K	N	E	I	I	P	T	G	G	H	D	A	D	G	V	L	K	Q	F	N	Y	D	E	V	I	R	P	E	T	T	V	E	A	L	A	T	L	R
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		T	E	S	M	G	E	T	A	E	N	L	A	E	M	Y	G	I	R	R	E	E	Q	D	R	F	A	L	L	S	H	Q	K	A	V	R	A	W	E	E	G	R	F	Q	D	E	V	V	P	V	P	V	K	R	G	K	E	.	E	I	L	V	E	Q	D	E	G	P	R	R	D	T	S	L	E	K	L	A	A	L	R
Template Known Secondary structure																	T																							T	T	T	T	T	T	T	B								T	T		.						S		S				T	T									S
Template Predicted Secondary structure																																																										.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	F	D	P	V	N	G	M	V	T	A	G	T	S	S	A	L	S	D	G	A	A	A	M	L	V	M	S	E	S	R	A	H	E	L	G	L	K	P	R	A	R	V	R	S	M	A	V	V	G	C	D	P	S	I	M	G	Y	G	P	V	P	A	S	K	L	A	L	K	K	A	G	L	S	A	S	D	I	G
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		P	V	F	R	E	G	G	.	T	V	T	A	G	N	S	S	P	L	N	D	G	A	A	A	V	L	L	V	S	D	D	Y	A	K	A	H	G	L	R	P	L	A	R	V	R	A	I	A	V	A	G	V	P	P	R	I	M	G	I	G	P	V	P	A	T	R	K	A	L	E	R	A	G	L	S	F	S	D	L	G
Template Known Secondary structure		B	S	S	S	T	T		.	S		B	G	G	G	B																						T				S													G	G	G	G	G	G	T													T			G	G	G		S
Template Predicted Secondary structure									.
Template SS confidence
		239	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	E	M	N	E	A	F	A	A	Q	I	L	P	C	I	K	D	L	G	L	I	E	Q	I	D	E	K	I	N	L	N	G	G	A	I	A	L	G	H	P	L	G	C	S	G	A	R	I	S	T	T	L	L	N	L	M	E	R	K	D	V	Q	F	G	L	A	T	M	C	I	G	L	G	Q	G	I	A	T	V
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		L	I	E	L	N	E	A	F	A	A	Q	A	L	A	V	L	R	E	W	S	L	S	M	E	D	Q	.	R	L	N	P	N	G	G	A	I	A	L	G	H	P	L	G	A	S	G	A	R	I	L	T	T	L	V	H	E	M	R	R	R	K	V	Q	F	G	L	A	T	M	C	I	G	V	G	Q	G	I	A	V	V
Template Known Secondary structure								S	B												T			T	T		T	.	T	B	S	T	T																												T	T		S									T	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		384	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	G	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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