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Job DescriptionP21151
Confidence100.00%DateThu Jan 5 11:37:50 GMT 2012
Rank24Aligned Residues298
% Identity23%Templatec1tqyC_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-ketoacyl synthase/acyl transferase; PDBTitle: the actinorhodin ketosynthase/chain length factor
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10 ..... ....20.........30......
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Query Sequence  EQVVIVDAI. RTPMG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RSKGGAFRNVRAEDLSAHLMR
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Template Sequence  RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACAR
Template Known Secondary structure 

TTST





SS

TTSS






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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   37..40.........50. ........60.. .......70.........80.
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Query Sequence  SLLARNPALEAAALD. . . . DIYWGCVQQTL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EQGFNIARNAALLAEVPHS
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Template Sequence  EAFA. ASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEG.
Template Known Secondary structure  .T

TTT

GGG
SSTTTTTT
SS

GGG

TTTSTTT

S.
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   83... ...90.........100.........110.........120.........130.........140.........150.........160
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGIS
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Template Sequence  . PVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEH. . . . . . . . . . . . . . . .
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GGGTTS
S


ST
B


TT
GGG................
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   161........170.........180.........190.........200.........210.........220...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  REMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVNGMVTAGTSSAL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ASRPFDGTRDGFV. . . . . . . L
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TT
TT

SB
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   224.....230...... .
 
   242.......250.........260.........270..... ....280.........290.........300.........310..
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Query Sequence  SDGAAAMLVMSESRAHELGLKPRARVRSMAVVGC. . . . . DPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFA. . . .
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Template Sequence  AEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQND
Template Known Secondary structure 
TT





S
SS


TT
T

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S
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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   313......320.........330.........340.........350.........360... ..
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Query Sequence  AQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERK. . . . . . . . . . . . . . . . . . . . . . . . . . . DV
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Template Sequence  RHETAAYKRA. LGEHA. RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKL
Template Known Secondary structure  .GGGG.SSS

T
B
TTTT

BTT

S
BTTB
S


BSS



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   318.320....... ..330.. .......340.........350.........360.........370.........380.........390.....
 
   366...370.........380......
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Query Sequence  QFGLATMCIGLGQGIATVFER
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Template Sequence  RSVLTVGSGFGGFQSAMVLRD
Template Known Secondary structure  STTT
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   396...400.........410......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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