Job Description P21151 Confidence 100.00% Date Thu Jan 5 11:37:50 GMT 2012 Rank 7 Aligned Residues 376 % Identity 39% Template c1afwB_ PDB info PDB header:thiolase Chain: B: PDB Molecule:3-ketoacetyl-coa thiolase; PDBTitle: the 1.8 angstrom crystal structure of the dimeric2 peroxisomal thiolase of saccharomyces cerevisiae Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		M	E	Q	V	V	I	V	D	A	I	R	T	P	M	G	R	S	K	G	G	A	F	R	N	V	R	A	E	D	L	S	A	H	L	M	R	S	L	L	A	R	.	.	.	N	P	A	L	E	A	A	A	L	D	D	I	Y	W	G	C	V	Q	Q	T	L	E	Q	G	F	N	I	A	R	N	A	A	L	L	A	E
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.																					.
Template Conservation																																																																		.
Template Sequence		P	E	D	V	V	I	V	A	A	N	R	S	A	I	G	K	G	F	K	G	A	F	K	D	V	N	T	D	Y	L	L	Y	N	F	L	N	E	F	I	G	R	F	P	E	P	L	R	A	D	L	N	L	I	E	E	V	A	C	G	N	V	L	N	V	.	G	A	G	A	T	E	H	R	A	A	C	L	A	S	G
Template Known Secondary structure		T	T															T	T	T	S	T	T	T	T																	T	S								G	G	G									S	S	S	G	.	G	G	G											T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		V	P	H	S	V	P	A	V	T	V	N	R	L	C	G	S	S	M	Q	A	L	H	D	A	A	R	M	I	M	T	G	D	A	Q	A	C	L	V	G	G	V	E	H	M	G	H	V	P	M	S	H	G	V	D	F	H	P	G	L	S	.	.	.	.	.	R	N	V	A	K	A	A	G	M	M	G	L	T	A	E
Query Conservation																																																														.	.	.	.	.
Alig confidence																																																														.	.	.	.	.
Template Conservation
Template Sequence		I	P	Y	S	T	P	F	V	A	L	N	R	Q	C	S	S	G	L	T	A	V	N	D	I	A	N	K	I	K	V	G	Q	I	D	I	G	L	A	L	G	V	E	S	M	T	N	N	Y	K	N	V	N	P	L	G	M	I	S	S	E	E	L	Q	K	N	R	E	A	K	K	C	L	I	P	M	G	I	T	N	E
Template Known Secondary structure				T	T	S								G	G	G															T	T	S		S														G	G	G	S		T	T		S										T	T	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	A	R	M	H	G	I	S	R	E	M	Q	D	A	F	A	A	R	S	H	A	R	A	W	A	A	T	Q	S	A	A	F	K	N	E	I	I	P	T	G	G	H	D	A	D	G	V	L	K	Q	F	N	Y	D	E	V	I	R	P	E	T	T	V	E	A	L	A	T	L	R	P	A	F	D	P	V	N	G	M
Query Conservation
Alig confidence																																																.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		N	V	A	A	N	F	K	I	S	R	K	D	Q	D	E	F	A	A	N	S	Y	Q	K	A	Y	K	A	K	N	E	G	L	F	E	D	E	I	L	P	I	K	L	P	D	G	S	.	.	.	.	I	C	Q	S	D	E	G	P	R	P	N	V	T	A	E	S	L	S	S	I	R	P	A	F	I	K	D	R	G	T
Template Known Secondary structure							T	T																							T	T	T	T	T	T	T	B						T	T	S		.	.	.	.				S		S				T	T							T	T				S	S	S	T	T	T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	G	T	S	S	A	L	S	D	G	A	A	A	M	L	V	M	S	E	S	R	A	H	E	L	G	L	K	P	R	A	R	V	R	S	M	A	V	V	G	C	D	P	S	I	M	G	Y	G	P	V	P	A	S	K	L	A	L	K	K	A	G	L	S	A	S	D	I	G	V	F	E	M	N	E	A	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	A	G	N	A	S	Q	V	S	D	G	V	A	G	V	L	L	A	R	R	S	V	A	N	Q	L	N	L	P	V	L	G	R	Y	I	D	F	Q	T	V	G	V	P	P	E	I	M	G	V	G	P	A	Y	A	I	P	K	V	L	E	A	T	G	L	Q	V	Q	D	I	D	I	F	E	I	N	E	A	F	A
Template Known Secondary structure				T	T	S	B																						T				S													G	G	G	G	G	G														T			G	G	G		S							S	B
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	I	L	P	C	I	K	D	L	G	L	I	E	Q	I	D	E	K	I	N	L	N	G	G	A	I	A	L	G	H	P	L	G	C	S	G	A	R	I	S	T	T	L	L	N	L	M	E	R	K	D	V	Q	F	G	L	A	T	M	C	I	G	L	G	Q	G	I	A	T	V	F	E	R
Query Conservation
Alig confidence																	.	.	.																																		.	.
Template Conservation																	.	.	.																																		.	.
Template Sequence		A	Q	A	L	Y	C	I	H	K	L	G	I	D	L	N	.	.	.	K	V	N	P	R	G	G	A	I	A	L	G	H	P	L	G	C	T	G	A	R	Q	V	A	T	I	L	R	E	L	K	K	D	.	.	Q	I	G	V	V	S	M	C	I	G	T	G	M	G	A	A	A	I	F	I	K
Template Known Secondary structure												T			G	G	.	.	.	G	B	S	T	T										T	T	T													S		T	T	.	.										T	T	T
Template Predicted Secondary structure																	.	.	.																																		.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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