Return to main results Retrieve Phyre Job Id

Job DescriptionP77746
Confidence88.68%DateThu Jan 5 12:32:26 GMT 2012
Rank193Aligned Residues199
% Identity4%Templated1xs5a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  LKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL
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Template Sequence  KDETVGVGVLSEPHARLLEIAKEEVKK. . QHIELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFNQEHNGDLVSVG
Template Known Secondary structure 


STTT..TT
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TSSST

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   5....10.........20.........30. ........40.........50.........60.........70.........80..
 
   176...180.. .......190.........200.........210.........220.. .......230.....
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Query Sequence  ICSNRHP. . RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNR. . . . . . . . . . . . . . . . . . KISFRGSSLLTII
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Template Sequence  NVHVEPLALYSRTYRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQNVRNVVLQEVESALL
Template Known Secondary structure 



SS

SGGG

TT

STTS

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GGG
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GGG
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   236...240.........250.........260.........270.........280.........290......
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Query Sequence  NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL
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Template Sequence  PRVFDQVDGAVINGNYAIMAGLSARRDGLAVEPDASAYANVLVVKRGNEADARVQAVLRAL
Template Known Secondary structure  GGGSS
TT

TTTT
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GGGG
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   163......170.........180.........190.........200.........210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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