Job Description P77746 Confidence 32.46% Date Thu Jan 5 12:32:26 GMT 2012 Rank 384 Aligned Residues 201 % Identity 8% Template d1r9la_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.59

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		E	L	K	K	N	F	I	I	Y	G	P	Q	L	I	S	C	S	N	N	S	M	L	I	R	C	L	R	Q	D	S	S	V	E	I	E	C	H	D	I	L	M	S	A	E	N	A	E	E	L	L	V	H	R	K	A	D	L	V	I	T	Q	M	P	V	I	S	R	S	V	I	C	M	P	L	H	T	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																															.																																															.	.	.	.
Template Conservation																															.
Template Sequence		G	K	G	I	T	V	N	P	V	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	.	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y
Template Known Secondary structure		T	T	T									S		G	G	G														.	T	T																					T	S	S									T	T	T							T	T	G	G	G	T
Template Predicted Secondary structure																															.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
										171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.															.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	I	R	N	T	L	I	C	S	N	R	H	P	R	I	T	D	N	S	T	Y	E	Q	I	M	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	Q	L	I	S	K	S	A	G	V	D	D	I	Q	M	E	I	D	E	R	F	M	N	R	K	I	S	F	R	G
Query Conservation		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	G	V	F	V	N	G	A	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T	H	N	Q
Template Known Secondary structure				S		S																			T			B	G	G	G	G	G	S					G	G	G		S	S	S	S	S	S								T	T	S													T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.								.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																				270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	L	L	T	I	I	N	S	I	A	V	T	D	.	.	.	.	.	.	.	L	L	G	I	V	P	Y	E	L	Y	N	S	Y	R	D	F	L	N	L	K	E	I	K	L	E	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	S	I	K	L	Y	I	S	Y	N	K	S
Query Conservation																.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	Y	A	A	M	M	A	D	T	I	S	R	Y	K	E	G	K	P	V	F	Y	Y	T	W	T	P	Y	W	V	S	N	E	L	K	P	G	K	D	V	V	W	L	Q	V	P	F	S	A	L	P	G	D	K	N	A	D	T	K	L	P	N	G	A	N	Y	G	F	P	V	S	T	M	H	I	V	A	N	K	A
Template Known Secondary structure		S															T	T										S	S	S					S		B	T	T	T					B		S	S				T	T		T	T				B		T	T	S		B		S	S		S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		283	.	.		.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		S	L	N	.	N	L	V	F	S	R	F	I	D	R	L
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		W	A	E	K	N	P	A	A	A	K	L	F	A	I	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions