Return to main results Retrieve Phyre Job Id

Job DescriptionP77746
Confidence99.76%DateThu Jan 5 12:32:26 GMT 2012
Rank21Aligned Residues206
% Identity16%Templated1i6aa_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  SELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRN
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Template Sequence  ETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEM. YLHEAQTHQLLAQLDSGKLDAVILALVKESEAFIEVPLFDEPM
Template Known Secondary structure 
TT

TTT
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TS
S

GGGTTS
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   87..90.........100.........110.........120.. .......130.........140.........150.........160.....
 
   174.....180.... .....190.........200.........210.........220.........230.........240.........250..
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Query Sequence  TLICSNRHPRI. TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELY
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Template Conservation                                                                        
         
Template Sequence  LLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALAV
Template Known Secondary structure  TTSGGGG
S
GGGGTTS

TTTT
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TTSS
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TTS
TTTTS
TTS
BGGGS
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   253......260.........270.........280.........290.........300
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Query Sequence  NSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF
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Template Sequence  PPERKRDGVVYLPAIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARM
Template Known Secondary structure 
SSSTT
SS


TT
TT
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   246...250.........260.........270.........280.........290...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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